Coregonus clupeaformis (lake whitefish): 121569950
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Entry
121569950 CDS
T08357
Symbol
myd88
Name
(RefSeq) myeloid differentiation primary response protein MyD88
KO
K04729
myeloid differentiation primary response protein MyD88
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04620
Toll-like receptor signaling pathway
cclu04621
NOD-like receptor signaling pathway
cclu05132
Salmonella infection
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121569950 (myd88)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121569950 (myd88)
04621 NOD-like receptor signaling pathway
121569950 (myd88)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121569950 (myd88)
09171 Infectious disease: bacterial
05132 Salmonella infection
121569950 (myd88)
BRITE hierarchy
Motif
Pfam:
Death
TIR_2
TIR
Motif
Other DBs
NCBI-GeneID:
121569950
NCBI-ProteinID:
XP_041737245
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All DBs
Position
7:52799690..52822399
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AA seq
287 aa
AA seq
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MSALWKSSLDLWNIPLRALNINVRKRLGLFLNPRNTVASDWMSVAENMGFSYLEIKNYED
CQDPTRKILEDWQSRCPGAKVGKLVSILDNVDRKDVVEDLRDLIEEDCRRYIERQNEPPV
QVPEVDSCVPRTPERQGITLEDDPQGGVPELFDAFICYCLSDFDFVHEMIQQLEQTDHKL
KLCVFDRDVLPGSCVWTITSELIEKRCKRMVVVISDEYLDSDACDFQTKFALSLCPGARS
KRLIPVVYRSMKKPFPSILRFLTVCDYTRPCTQSWFWVRLARALSLP
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctttgtggaagtctagtttagacctgtggaatattccattgagagcgctgaat
atcaacgtgagaaaaagattgggactgtttttaaatccgagaaacactgtggcatcagac
tggatgtctgtcgcagagaacatgggcttctcttatttagagatcaagaattacgaggat
tgccaggacccgacacggaagattctagaggactggcaatcacgttgtcccggagctaaa
gttggaaagttagtttcaattctggataacgtggacagaaaagatgttgtggaggatctt
cgagatctcattgaggaggactgtaggaggtacatagagagacagaatgagcccccagtc
caggtgcctgaggtggacagctgtgtccccagaaccccagagcgacaaggtatcaccctg
gaggatgacccacaagggggtgtaccggagctgtttgatgccttcatctgctactgtcta
agtgactttgactttgtccatgagatgatccagcagttggagcagacggaccacaagttg
aagctgtgtgtgtttgaccgggacgtcctgcctggatcctgtgtttggaccatcaccagc
gaactcatcgagaagaggtgtaagaggatggtggtggtgatatctgatgagtacctggac
agtgatgcctgtgacttccagaccaagttcgccctcagtctctgccctggtgcgcggagc
aagcggctgatccctgtggtgtaccggtctatgaagaaacctttccccagtatcctgagg
ttcctgactgtgtgcgactacacacgaccctgtacacagtcctggttctgggtccggctg
gccagggctctctccctgccctga
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