KEGG   Coregonus clupeaformis (lake whitefish): 121570617
Entry
121570617         CDS       T08357                                 
Symbol
chmp4c
Name
(RefSeq) charged multivesicular body protein 4c
  KO
K24782  charged multivesicular body protein 4C
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144  Endocytosis
cclu04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121570617 (chmp4c)
  09143 Cell growth and death
   04217 Necroptosis
    121570617 (chmp4c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121570617 (chmp4c)
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121570617 (chmp4c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121570617 (chmp4c)
Membrane trafficking [BR:cclu04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    121570617 (chmp4c)
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    121570617 (chmp4c)
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   121570617 (chmp4c)
  Exosomal proteins of colorectal cancer cells
   121570617 (chmp4c)
SSDB
Motif
Pfam: Snf7 FliG_N DUF6437 Kinesin_assoc
Other DBs
NCBI-GeneID: 121570617
NCBI-ProteinID: XP_041738021
LinkDB
Position
7:complement(18843222..18846125)
AA seq 234 aa
MSKLFKGSSSSISSSHYPSSSRSKHGHRSRTGPTPQDAIHKLRETEAMLAKKQDFLEKKI
EQEIMIAKKNGLKNKRVALQALKRKKRFEQQLTQIDGTLSTIEFQREALENANTNTEVLK
TMGYAAKAIKGVHQNMDLDKIESLMQDITESQEVAQEICDAISRPFGDSFDEDELLAELA
ELEQEELEESMKNMCRVPSVPASKLPSSRPSERTPSKKRVEDHDEMQMLAAWAM
NT seq 705 nt   +upstreamnt  +downstreamnt
atgtccaaattgttcaagggaagctcaagttcgatctcttcaagccactatccaagctct
tcgagatcgaaacatggccatcgctcgcggacaggccctaccccgcaggacgccattcac
aaacttcgagaaacagaggcgatgctggcgaaaaaacaagacttcttggaaaagaaaatt
gaacaagaaattatgatagcaaagaagaatggcctcaagaataaacgtgtggccctccag
gcactgaagaggaagaagcgctttgagcagcagctcacacagattgacgggaccctctcc
accattgagttccaaagagaggcattggagaatgccaacaccaacactgaggtcctgaag
accatgggctacgctgccaaggccatcaagggggtccaccagaacatggatctggataag
attgaatctctgatgcaggacatcactgagtctcaggaagttgcccaggagatctgtgat
gctatctcccgacctttcggagattcatttgatgaggatgagctgttggcagagctggca
gagttggaacaggaggagctggaggagagcatgaagaacatgtgcagagtgcccagtgtt
cccgcctccaaactgccctcatctcgacccagcgagcgcaccccttccaagaagagggta
gaggatcatgacgaaatgcagatgctggcagcctgggcaatgtaa

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