Coregonus clupeaformis (lake whitefish): 121570749
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Entry
121570749 CDS
T08357
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A-like
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121570749
04020 Calcium signaling pathway
121570749
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121570749
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121570749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
121570749
NCBI-ProteinID:
XP_045076945
LinkDB
All DBs
Position
7:complement(7247513..7371217)
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AA seq
2503 aa
AA seq
DB search
MARFENEMPSRYGGGHGHGPGHGHGPGGPGRGGSRQGGPPGGPGGQRVYKQSMAQRARTM
ALYNPIPVRQNCFTVNRSLFIFSEDNFVRKYAKKITEWPPFEWLILATICANCIVLALEQ
HLPDGDKTPLSERLDDTEPYFIGIFCFESGIKILALGFAFHKNSYIRNGWNAMDFVVVCT
GILSTVGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILM
FAIIGLEFYMGKFHTTCFDIHTDEIREEFPCGTEAPSRLCPNGTVCRQYWLGPNYGITQF
DNILFAVLTVFQCITMEGWTDLLYYSNDASGSAWNWMYFIPLIIIGSFFMLNLVLGVLSG
EFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILADDEDPDAFDGTRRRPT
IKNHKNKTDLLNPEDGDGDLAVGSPFARTSLKSSKLEGSNFHKRERRLRFFIRRIVKTQY
FYWSVLCLVGLNTMCVAVVHYDQPEPLSDFLYFAEFVFLSIFMSEMGIKIYGLGSQPYFH
SSFNCFDCIVICGSIFEVLWGFIQPGTSFGISVLRALRLLRIFKVTKYWASLRNLVVSLL
NSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFESGTPPTNFDTFPAAIMTVFQILTGE
DWNMVMYDGIESQGGVNNGMVFSVFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKEEE
AASKKNALQKAKEVAEVSPQSAANLSIAAEKVNSTGHNASDPFLDCKEQQKNSKGGSKSV
WEQRTKELRKQTLMTSREALYNELDPEDRWKVNCSRHIRPDMKTHTDRPLVVDPQENRNN
NTNKTTKEPDPRLSQQHADELLRKQTHAHERGGGGGGGGVSGSGSGPGRPYERADSTESR
RSRKESKEHQELQHHHSSHTCLDATILGQSGEERTQRRHHHPRGQVGSSEHRKPRQHRMP
PEDEEGGGGGGGGGGGGEIRHKSRGTEGGGEGEQEGGEGGERRQRRHRHGTQSGCDGEGK
RTRQHRRKDGPNLSTTRPIQKSLCRQDSQYSEDMDNVMNSKLATSQPQLPPGSTQQPCPA
SGLPSPANHITPGPGFGPAGLNTHLTNSSSHLGTDGSLVPAYGSSTQIADHTAVDIPSHN
AILQVNKNANTEPLPKKEDKDDDDDEKGDEDGPKPMPPYSSMFILSTTNPFRRLCHYIVT
LKFFEFGILSTIAMSSIALAAEDPVWPESPRNNVLRYFDYVFTGVFTFEMLIKMVDLGLV
LHQGSYFRDLWNILDFIVVSGALVAFAFTSSSGGSSKGKDISTIKSLRVLRVLRPLKTIK
RLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGRFFYCTDESKEFERDCR
GEYLVYERNNEVKAQKREWKKYDFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATYENQ
GPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEDYSLEKNERGCIDF
AINAKPLTRHMPKNKQSFQYRMWEFVVSPPFEYTIMAMIALNTIVLMMKYDGASPAYEAV
LANLNIVFTSLFSMECVLKIIAFGVLNYFKDAWNIFDCVTVLGSITDILVTELGMNNFIN
LSFLRLFRAARLIKLLRQGETIRILLWTFVQSFKALPYVCLLIGMLFFIYAIIGMQLFGN
IGMEEEEGSAINEHNNFRTFFQALMLLFRSATGEAWHDIMLACLGGKHCDPLAGNTEPEC
GSQFAYLYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRIWAEYDQA
ACGRISCRDMYDMLMHMSPPLGLGKRCPARVAYKRLLRMDLPVADDNSVHFNSTLMALIR
TALDIKIAKGGVDKHQMDAELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMI
MEYYRQSKAKRSQARLEAEQNRTTLPFQRVEPPSPIQDGPLSLPPTQPADPVNSLPVEGG
VPGSQSWVTVRAQEMSQRVGSWSPERQHSEDGLDSRHNSQTVEMREMGRDGYSDTEHFHP
MEGHGRAASMPRLPGDNQQRRKGRQRGNNLSTITDNSPMKRSASSLGHSRSGRGQRERGG
ANDYAMDRVIPEEGGAPRHSHRRRDRSHRASERSLCRYTDADTGLGTDLSTTTQSGDLPP
KEKDRDRDRDRGRQKDRKHHHHHHHHHSGSVDKERYTPDRADRGGEHSGHRQPRGDRDHD
RDREHDRRWSRSPSEGRECMTHRQGSSSVSESPAPSTSGTSTPRRGRRQLPQTPATPRPH
VTYSPVVRKAMATPPGAQPQGRNPAPAPAPHRFSPEPPQGPPPPHHGSPRQARHPPPRWG
DGGGGGESGSLEGDGCFYNQDYQDYDREHHEPPAYEQSPTQGNPHNPHPLNHPTLPPQNH
PPTPQQHPINPHPNNPHPNNPHSRTSPRTSHHAPPPNTTPIPQGQQPPPPRRLPNGYRAS
SPSSQHHHGPTHPGPHKVPPPQPRGPRTKGLHEPYNNTDDNRC
NT seq
7512 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggttcgaaaacgagatgccgtccaggtatggcggcggccacggtcatggacca
gggcatgggcatggacctggaggtcctggccgcggaggcagcaggcagggcggcccgccc
ggaggccccgggggccagcgggtctacaagcagtccatggcgcagagagcccggaccatg
gccctgtacaaccccatcccggtgcgtcagaactgcttcaccgtcaaccgctcgctgttc
atcttcagcgaggataactttgtgagaaaatacgccaaaaagattacagaatggcctccg
tttgagtggttgatcctggccaccatttgtgctaactgtatcgtcctggctctggagcaa
catctgcctgatggagacaagactcctctatctgaacgtctggatgacactgagccctac
ttcatagggatcttctgttttgagtcaggcattaagatcctggctctaggatttgccttc
cataagaactcctacataaggaacggatggaatgccatggactttgtagtagtatgcaca
gggatcttgtctacagtgggatcggacttcgatttgcggactctgagagcggtccgtgtg
ctgagacccctcaaactggtgtctgggatacccagcctccaggtggtcctcaagtccatc
atgaaggctatgatcccactgctgcagatcggcctgttgctattcttcgccatcctcatg
ttcgctatcattggcctggagttctacatgggcaaattccacactacctgcttcgacatt
cacacagatgagattcgcgaggagtttccgtgtgggaccgaagccccgtcgagactatgt
ccaaacgggaccgtgtgtcgacagtattggctggggcctaactacggcatcacccagttt
gacaacatcctgtttgccgtgctcacagtcttccagtgtattaccatggagggatggact
gacctgctctactatagcaacgatgcctcagggagcgcgtggaactggatgtacttcatc
cccctcatcatcatcggctctttcttcatgttgaacctggtgctgggtgtactgtctggg
gagtttgccaaagagagagagcgagtggagaacaggagtgagtttctgaagctgaggaga
cagcagcagatagagagagagctcaatggatacctggagtggatttgtaaagcagaagaa
gtgatcttagcagacgatgaagaccctgatgcctttgacggtacccgcaggagacccacc
atcaaaaaccacaagaacaaaacagatctccttaacccagaggatggggatggagacctg
gcagtgggttctccctttgcgcggaccagtctgaagagttcaaagctggagggctctaac
ttccataagagggagcgtcgtctgcgtttcttcatccgacgcattgtgaagacccagtat
ttctactggagtgtactgtgtctggtgggactgaacaccatgtgtgtggctgtagtacac
tacgaccagcctgaaccactatcagacttcctctactttgcggagttcgtcttcttgagt
atcttcatgtctgagatgggtataaagatttatggactggggtcacagccttactttcac
tcctcctttaactgctttgactgcattgtaatatgtggcagcatattcgaggtgctgtgg
ggttttatccagcctgggacatcctttggtatcagtgtattacgagctctaaggttactg
agaatcttcaaagtcaccaagtactgggcatctttgaggaacctggttgtatctctgctc
aactccatgaaatccattataagcctgctcttcctcctcttcctctttatcgtcgtcttc
gctctgttgggcatgcaactcttcggaggacagtttaattttgaatctggcactcccccg
accaactttgatactttccctgcagcaataatgactgtgttccagatcctgaccggagaa
gactggaacatggtaatgtatgatggaatcgagtctcagggaggagtcaacaacggaatg
gtcttctcagtcttcttcatcgtgctcacactcttcggcaactacactctgctgaatgtg
ttcttggccatcgctgtggacaatctggctaacgcacaggaactcactaaggaagaggaa
gccgcttccaagaaaaatgctttacagaaagccaaggaggtggccgaagtaagccctcag
tctgcagccaacctctccatagcggccgagaaagtaaacagcacaggtcacaacgcttcc
gacccctttctggactgtaaggagcagcagaagaacagtaagggtggtagtaagtcagtg
tgggaacagaggaccaaggagctgaggaaacagactctaatgaccagcagagaggccctc
tacaacgaactggacccagaggaccgctggaaggtgaactgctcccgccacatccgtccc
gacatgaagacccatacagaccgccctctagtggtggacccccaggagaaccgcaacaac
aacaccaacaagaccaccaaagaacctgacccccgcctcagccagcagcacgccgacgag
ctgctccgcaagcagacacacgcccacgagagaggaggtgggggaggaggaggtggggtc
tcagggtctggttcgggccctggaaggccctacgagagggcggactctacggagagccgc
aggagccgcaaggagagcaaggagcaccaggagctccaacaccaccactcctcccatacc
tgcctagatgcaacgatactgggccagagtggagaggagaggacccagaggaggcaccac
cacccacggggccaggtgggctcatcggagcacaggaaaccccgccagcaccgcatgccc
ccagaggacgaagaggggggaggtggaggaggaggtggtggaggaggaggggaaattcgg
cacaagagcagggggacagaaggaggaggcgagggggagcaggaggggggtgagggaggt
gagaggaggcagaggcggcatcgacatggcactcagtcagggtgtgatggtgaggggaag
aggacgcggcaacaccgcaggaaggatggtcccaacctgtccaccacacggcccatccaa
aagagcctctgtagacaggacagccagtacagcgaggacatggacaatgtcatgaacagt
aaactggccaccagccagccccagctacccccaggctccacccagcagccctgcccagcc
tcgggcctccccagcccagccaaccacattactccaggcccaggctttggccctgcaggc
ctcaacactcacctgaccaacagcagctcccacttgggcacagatggaagcctggttcct
gcatacggaagtagcacccagatagcggaccacacggcagtggacataccttcccacaac
gccatactacaggtcaataagaatgctaacacggagcctctgcctaagaaggaggataag
gatgatgatgatgatgagaagggtgatgaagatggacccaaaccaatgcctccctatagc
tccatgttcatcctctctaccaccaacccgttccggagactatgccactacattgtgact
ctgaaattctttgagtttggtatcctgtctaccatcgctatgagcagtatcgccctggca
gcagaagaccccgtctggccagaatcacctcgcaacaatgttctgcgctacttcgactat
gtgtttacgggagtgttcacctttgagatgttgattaagatggtggatctgggcctggtg
ttgcaccagggctcctatttccgtgacctgtggaacatcctggactttatagtggttagt
ggtgctctggtggccttcgccttcacgagcagtagcggggggagcagtaaggggaaagac
atcagcacgatcaagtctctgagggttctgagagtgttgcgacctctgaagactatcaag
cgtcttccaaagctcaaggctgtatttgactgcgtggtcaactccctgaagaacgtcctg
aacatcctcatcgtatacatgctcttcatgtttatatttgctgtggtggccgtgcagctg
ttcaaaggcagattcttctactgcactgacgagtccaaagagtttgagcgcgattgcagg
ggcgaatatctagtctatgagcggaataatgaagtgaaggcgcagaagcgggagtggaag
aagtacgatttccactacgacaacgtgctttgggccctgctcaccctcttcactgtgtct
accggagaggggtggccgcaggtgctgaaacattcagtagatgcgacttatgagaatcag
ggcccgagcccggggtaccggatggagatgtccatcttctacgtggtgtacttcgtggtc
ttccccttcttcttcgtcaatatcttcgtagctctcatcatcatcactttccaggagcaa
ggagacaagatgatggaggattacagtttagagaaaaacgagagaggctgcatagacttc
gccattaatgccaaacccctgacacgacacatgcctaagaacaagcaaagcttccagtac
cgcatgtgggagtttgtggtgtcgccgccattcgagtatacaatcatggctatgatcgcg
ctcaatactattgtactgatgatgaagtatgacggagcctctccggcctacgaggctgtg
ctggccaacctgaacatcgtgttcacgtcgctgttctccatggagtgtgtgctcaagatc
atcgcctttggagtactgaattacttcaaagatgcctggaacatttttgactgtgtgaca
gtcctgggcagcattacagatattttagtgactgagctcgggatgaataacttcatcaac
ttgagtttcctgagactgttcagggctgccaggctcatcaaactgctccggcagggagag
accatccgcatcctgctctggacctttgtccagtccttcaaggcgctgccgtacgtgtgc
ctgcttatcggcatgctgttcttcatctatgccatcatcgggatgcagctgtttgggaac
atagggatggaggaggaggaggggagcgccatcaacgaacacaacaacttcaggactttc
ttccaagctctcatgctgctcttcaggagtgccacgggcgaggcgtggcatgacatcatg
ctggcgtgtcttggagggaagcactgtgatcctctggcagggaacactgaaccagagtgt
ggcagccagtttgcctacctctactttgtgtccttcatcttcttctgctccttcctgatg
ctgaatctgttcgtggctgtcatcatggacaactttgagtacctgaccagagactcctcc
atcctcggcccacatcatctagacgagtatgtcaggatatgggctgagtatgaccaagca
gcttgtggcaggatcagttgcagggatatgtatgacatgctcatgcacatgagccctccg
ctaggactggggaagaggtgcccggcacgggtggcctacaagaggctgctgcggatggac
ctcccggtcgccgacgacaactcggtccacttcaactccaccctgatggccctgatccgc
acagcgctggacatcaagatcgccaagggaggtgtggacaaacaccagatggatgcagag
ctgaggaaagagatgatggcgatttggcccaatctctcccagaagaccctggacctctta
gtcacgccacataagtcaacagacctgacggtggggaagatctacgctgccatgatgatc
atggagtactacaggcagagcaaggccaaacgctctcaggcgaggctagaggcggagcag
aatcgaacgacattaccgtttcagcgcgtggagccaccctctcccatccaggacgggcct
ctcagcctccctcctacccagccagcagaccccgtcaacagcctaccggtggaggggggg
gttccagggagccagtcgtgggtgacagtgcgggctcaggagatgtcccagagagtaggc
agctggagccctgagagacagcactctgaggacggcctggacagcaggcataactcacag
acggtagagatgagagagatggggcgtgacggttactcggataccgagcactttcatcca
atggaaggccacggaagggccgcttccatgccacgccttccaggcgacaaccaacagcga
aggaaagggaggcagcgtggaaataacctcagtactataacagataatagtcctatgaag
cgctcagcctcctcccttggtcacagtcgatctgggaggggccagagggaaaggggaggg
gccaatgattatgcaatggatcgtgtcatccctgaggagggcggagcaccgaggcacagc
caccgacgccgtgaccgaagccaccgggcctccgagcggtcactgtgtcgatatacagac
gcagatacaggactgggcacagacctgagcaccaccactcagtcaggtgacctgccaccc
aaggagaaggaccgtgaccgcgacagagaccgcggtcggcagaaagaccgcaaacaccac
caccatcaccaccaccatcacagcggctctgtggataaggagcgctacacaccagaccgc
gctgaccgggggggagagcacagtggtcacagacagccccgaggagacagagaccacgat
cgggacagggagcacgaccgtcgctggtcacggtcacccagcgagggcagagagtgcatg
acacacagacagggcagtagttcggtgagcgaaagtcccgccccctccacctcggggacc
agtaccccgagacgaggccgtcggcaactcccacagaccccggcaacgccccgcccacat
gtcacctactctcccgttgtccgtaaagctatggccacacctcccggagcccagccccag
gggcgcaatcccgcccccgcccccgcccctcaccgcttttcccccgagcccccccaagga
cctcccccgccacaccatggctcaccccgccaggcccgccacccccctccccgctggggg
gatggaggaggaggaggagagagtgggtcgctggagggcgacggctgcttctacaaccag
gactaccaggattacgaccgtgagcaccacgaaccacctgcctacgagcagagccccacg
cagggcaaccctcacaaccctcaccccctcaaccaccccactctgcccccgcaaaaccat
cccccaaccccacagcagcaccctatcaacccgcaccccaacaacccccaccccaacaac
ccccactcccgcacctcgcccaggacttcacaccacgcgcccccacccaacaccaccccc
atcccccaagggcagcagcctcctccccctcgacgcctccccaacgggtaccgcgcctcc
tccccctcctcgcaacaccaccacggccccacccaccccgggccccacaaggtcccccct
ccccagcccagagggccccgcacgaaaggcctgcacgaaccctacaacaacacggatgac
aacagatgctag
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integrated database retrieval system
