KEGG   Coregonus clupeaformis (lake whitefish): 121572327
Entry
121572327         CDS       T08357                                 
Name
(RefSeq) replication stress response regulator SDE2
  KO
K25059  replication stress response regulator SDE2
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cclu03041]
    121572327
   03032 DNA replication proteins [BR:cclu03032]
    121572327
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121572327
Spliceosome [BR:cclu03041]
 Complex C
  Other components
   Complex C specific factors
    121572327
DNA replication proteins [BR:cclu03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    121572327
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    121572327
SSDB
Motif
Pfam: SDE2 SDE2_2C Sde2_N_Ubi_vert Exonuc_VII_L NtrZ
Other DBs
NCBI-GeneID: 121572327
NCBI-ProteinID: XP_041740326
LinkDB
Position
17:complement(71335059..71341458)
AA seq 405 aa
MELFLSGPLLQFCNASFPTGASVRDLVDIFTKEKGIPSSDLYVKNNGRLSELDEKLQAGA
VYRLEPRLCGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKEMAEWLKKQA
DREAEKEQRRLERLQRKLAEPKHHFTDPNYEQQCHNLSERLDDSVLKGMQASSSGLVKVD
EAPKRKNPPPNKGQGKSKKKCFWTGVGGLDDLDSSEDDDAASDSGNSPSPSTSDSGSGVP
SSPVKGATPAHTSASQSRAEQTATPEAPSTSSNSSSGPSSPESPAEVQTQSQAEAVASGT
SDGGAQKEVVPTEETFPKTDSLSKAQSSTNKPTWEDGPLDLQAVHSDKELETLGLDRLKA
ELIARGMKCGGTLSERAVRLFSTIGLSAEDIDPALLAKPSKGKKK
NT seq 1218 nt   +upstreamnt  +downstreamnt
atggagttgtttctttctggtccacttcttcagttttgcaatgcttcttttcctactgga
gcctctgtccgtgatctagttgatatttttacgaaagaaaagggaatcccgtcatcagat
ctctacgtcaagaataatgggcgattatcagagcttgatgagaaattgcaggctggagcg
gtgtatcgactggagccccgtctctgtggtgggaaaggaggctttgggtctatgcttagg
gctcttggggcacaaattgaaaagaccacaaaccgcgaagcctgcagagatctaagcgga
aggcgactaagagatgtcaaccatgagaaagagatggcagagtggcttaagaagcaggca
gaccgcgaggcagagaaagagcaaaggcgtctggagagactgcagaggaagctggccgag
cccaagcatcacttcacagacccaaactacgagcagcagtgccacaacctctcagaacga
ctggatgactcagtcttaaaaggaatgcaagcctcttccagtggactcgtgaaagtagac
gaggcaccgaaacgcaaaaatccacctccaaacaaaggccaagggaaaagcaagaagaaa
tgcttttggacaggtgttggtggcctggatgacctggacagctctgaggatgacgatgct
gcaagcgacagcgggaactctccctctccctcaacatctgattctggctcaggggtaccc
agtagtcccgtaaagggagcaacgccagctcacacctcagcctctcagagcagagcggaa
caaacagcaactccagaagctcctagcacaagcagcaactccagctcaggacccagctct
ccagagagcccagcagaggtgcagacacaatctcaagcagaggcagtagcttcgggcacc
agtgatggtggggctcagaaggaggtggtccccacagaagaaacattcccaaagaccgac
agtctaagcaaagctcagagtagcaccaacaaacccacttgggaagatgggcccttagac
ctccaggcagtgcactcggacaaggagctggagactttggggttggacaggctaaaggca
gaactgattgcacgggggatgaagtgtgggggaaccctgtccgagcgcgctgttcgcctt
ttctccaccatagggctttctgcagaggacattgatcctgccctattggccaaacccagc
aagggcaagaagaaatga

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