Coregonus clupeaformis (lake whitefish): 121575652
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Entry
121575652 CDS
T08357
Name
(RefSeq) thiamine transporter 1
KO
K14610
solute carrier family 19 (thiamine transporter), member 2/3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
121575652
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121575652
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC19: Folate/thiamine transporter
121575652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folate_carrier
MFS_1
Motif
Other DBs
NCBI-GeneID:
121575652
NCBI-ProteinID:
XP_041744814
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MFFLVDMSQLYPTILLCVYGFFSNLRPSEPFFTAFLMGPDKNLTETQLVNEIYPIWTYSY
LVLLLPVFLATDYLCYKPVLILQAVSLVVTYFMLVKAQGVLAMQLLEFFFGLATATDIAY
YSYIYSVVDPAQYQRVTGYCRSVTLLGSAAGSLAGQLLVSVAQIPLFYLSVVTLVSAILA
FVAPWFLPMPGKSLFFHKSLGIDGEKPAHQNSRIPMDEAEDPESKVPLKIDEVTMVVTAS
DGGGASSGLVDVLRILWEDFLQCYSCPALLAWSVWWALSTCGYFQLVNYVQALWEKVLPS
QEFEIYNGYVETVSTLLGALAAFGVGSIKVSWAVWGELSLCIFSVVMAVAVYLMDTIRNI
WVCYTSYVVFRATYMLLITIATYQIAANLSMQRYALVFGVNTFIALLLQTLLTVVVVDTV
GLGLDIFPQFLIYAIYFAVIAVIFLMAGLYKLVLRRRSQPSAQTDSGENESDCLSRDSPP
LNELQQITNT
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgttttttttggttgacatgtctcaactatatcccacgatcttactttgtgtttatgga
ttcttctctaatctccgaccttctgagcctttctttactgcgtttttgatgggacctgat
aaaaaccttactgaaacacagcttgtaaatgaaatctacccaatatggacctattcctac
cttgtgctacttctcccagtcttcctggccacggactacctgtgctacaagcctgtgctg
atcctgcaggcggtgagcttggtagtgacctactttatgctagtgaaggcccagggtgtg
ctggccatgcagcttctggagttcttctttggcctcgccactgccacagatatagcctac
tattcctacatctacagtgtggtagacccggcccagtaccagagagtgactggatactgt
cgtagtgttacgttactgggctccgccgctggctcgctggctgggcagctgctagtgtct
gtagctcagatcccgctgttctacctcagtgttgtcacattggtgtcggccatcttggcc
tttgtggcgccctggtttttgcccatgcccggtaagagcttgttcttccataaaagcctg
gggatagacggggagaagccggcgcaccaaaacagcaggattcccatggatgaagcagag
gaccctgagagcaaagtgcctctgaagattgatgaggtcaccatggtggtgacggccagt
gatggtggtggcgctagcagtggcttagtggacgtgttaaggatcctatgggaagacttc
ctgcagtgctactcatgccctgccctcctggcctggtcggtgtggtgggccctctctact
tgtggctacttccagttggtcaactatgttcaggccctgtgggagaaggtcctgccttcc
caggagtttgagatctacaatggatacgtagagacagtctccaccttgttaggtgcgtta
gcagccttcggggtgggctccatcaaggtctcctgggcagtctggggagagctgtctctc
tgcatcttctcagtggtcatggctgtggctgtgtacctcatggacaccatcaggaacatc
tgggtgtgctacacctcctatgtggtcttcagagccacctacatgctgctcataaccatc
gctacgtatcagattgctgccaacctgagcatgcagcgatatgccttggtgtttggagtg
aacactttcatcgccctgctgcttcagactctgcttactgttgtggtagtggacactgtc
gggctgggcctggacattttcccacagtttctcatatacgccatctactttgctgtgatc
gcagtgatcttcctcatggccgggctgtacaagctggtgttgaggagaagatcccagcca
tcggcccagactgacagtggagagaacgagtcagactgccttagcagagactctcctccc
ctcaatgagctgcagcagatcacaaatacatga
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