Coregonus clupeaformis (lake whitefish): 121578257
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Entry
121578257 CDS
T08357
Name
(RefSeq) CXXC-type zinc finger protein 1-like
KO
K14960
COMPASS component SPP1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121578257
03036 Chromosome and associated proteins [BR:
cclu03036
]
121578257
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
121578257
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
121578257
COMPASS/SET1 complex (yeast)
121578257
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
121578257
NCBI-ProteinID:
XP_041748414
LinkDB
All DBs
Position
12:43042929..43062706
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AA seq
577 aa
AA seq
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MAKTSQMDSEVSDFEPVPGLESSMEGENAPVYCICRKPDINCFMIGCDNCNEWFHGNCIN
LTEKMAKAIRQWYCLQCQDKNPSLEIKYRPKKSREKEAESQREPEIHFERQNSTPDYKSE
KRRGSKVKRSARMCGECEPCLRTEDCATCDFCKDMKKFGGPNKIRQKCRFRQCDVRARKM
LRVKDEEFNLRERRDNSYHRRRRYSDDYDSEAELYEKYKAAGYDEYMPWLSDEDDGPPFS
PVLRKKAVKVKHVKRRENKFDKKKASRRHKQKQKHKDKLRHSDKGDASDGGGQRQCLGPS
CVEAARANSKYCSEECGIKLAANRIFEILPQRIQQWQQSPCVAEEQGKKQLERIRKDQQN
ARMRLTDMEKRFHELEGIIAKAKQQVVQQDEETNEGDNEETDLLIFCVSCSHPINPKVAL
RHMERCYAKYESQTSFGSMYPTKIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVP
GDEVCGCPLVRNVFEVTGEYCRVSKRKCNKHYNWEKLRRAEVDLERVRVWYKLDELFEQE
RNMRTAMTNRAGLLALMLHQTIQHDPLTTDLRCNKDR
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagacatcgcaaatggacagtgaagtgtcagacttcgagcctgttccggggctt
gagagcagtatggagggggagaatgcaccagtgtactgcatttgtcgaaaacctgacatc
aattgcttcatgattggttgtgacaattgcaatgagtggtttcatggtaactgcatcaat
ctcacagagaagatggcaaaagctattaggcagtggtactgcctgcagtgccaagacaaa
aacccatcattggagataaaataccgtccaaagaagagccgtgaaaaggaggcagagagc
cagagagagccagagatacattttgaaagacagaacagcactccagattataaatctgaa
aagcgccgtggatcaaaggttaagcgctctgctcgtatgtgtggggagtgcgaaccctgc
ttgaggactgaggactgcgccacatgcgacttctgcaaggacatgaagaaatttgggggt
cccaacaaaataagacagaagtgtcgatttaggcagtgtgatgtccgagccaggaaaatg
ttgcgtgtgaaggatgaagagtttaatttgcgtgaaaggagggacaattcctaccaccgg
cgaagacgatattcagatgactacgatagtgaggcagaactctatgaaaagtacaaggcg
gcaggatacgacgaatacatgccatggctcagtgatgaggatgacgggcctcccttcagc
cctgtcctgcgaaagaaagctgttaaggtcaagcatgtgaagagacgggaaaataaattt
gacaagaaaaaagcatcacggcggcacaaacagaagcagaagcacaaggacaaacttagg
cacagcgataagggcgatgccagcgatggaggagggcagcggcagtgcctcgggcccagc
tgtgtggaggcagcacgagccaactccaaatactgctcagaggaatgtggcataaagctg
gctgccaaccggatctttgagattctccctcagcgtatccagcagtggcagcagagcccc
tgcgtcgctgaggagcagggcaagaagcaactggagcggatccggaaagatcagcagaac
gcccgcatgcgcctcaccgacatggagaaacgcttccacgagctggagggcatcattgcc
aaggccaagcagcaggtggtccagcaggatgaggagacgaatgaaggggataatgaagaa
acagatctgctgattttctgtgtgtcctgcagtcaccctatcaacccaaaggtggcactg
cgacacatggagagatgttatgctaagtatgagagccagacttcttttggttccatgtac
ccaactaagatcgaaggagcaacaagactcttctgcgacgtgtacaacccccagagcaag
acctactgcaagaggcttcaggtcttgtgcccagagcattccagggacccaaaggtccca
ggggatgaggtgtgcggctgtcctctggtccgtaatgtgtttgaggtgacgggagaatac
tgcagggtttctaagcgcaaatgtaataagcactacaactgggagaagctcagaagagct
gaggtggacctggagcgtgtccgagtgtggtacaaactagatgagctctttgagcaggag
cgcaacatgaggactgctatgaccaacagggcaggtctacttgctctcatgctgcaccaa
accattcagcatgaccccctgacaacggatctccgttgcaacaaggacagatag
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