Coregonus clupeaformis (lake whitefish): 121579333
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Entry
121579333 CDS
T08357
Name
(RefSeq) zinc finger and BTB domain-containing protein 16-A
KO
K10055
zinc finger and BTB domain-containing protein 16
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121579333
04121 Ubiquitin system [BR:
cclu04121
]
121579333
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121579333
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121579333
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2_4
zf-C2H2
BTB
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_15
zf_UBZ
zf-C2H2_8
Endonuclease_7
MIX
zf-C2H2_REST
Zn_ribbon_TiaS
zf-MYST
Motif
Other DBs
NCBI-GeneID:
121579333
NCBI-ProteinID:
XP_041749780
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All DBs
Position
13:15707999..15900753
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AA seq
668 aa
AA seq
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MDLTKIGMIQLQNPNHPTALLQKANQMRLAGTLCDVIIMVDSQEFHAHRTVLACTSKMFE
ILFHRNSQHYTLDFLSPKTFQQILEYAYTATLQAKVEDLDDLLYAAEILEIEYLEEQCLK
ILETIQSSDDNDTEVNMNDGGTEEDDERKGRQGGKNAKKHSMEGSYHSAAQQASALASMV
DQSPSVSTSFGLSTMSPTKAAVDSLMSIGQSLLQQGFGGEHLTHGNSHHQLMTEIKTEMM
QVDEGGGHESPRTMESSASSNCERSGELDKNRDGPGTPTRSSVITSARELHYVREDGMGD
PQADGGQMGLEAMAGMTGMTEKHLASLYSLPPNHKNEAMLSMPASMASSLHMSPALAMSM
DFSAYGGLLPQSFIQREFFNKLGELAAGMKPDGRNQHERCNVCGAELPDNEAVEQHRKLH
SGMKTYGCELCGKRFLDSLRLRMHLLSHSAGEKAIVCDQCGAQFQKEDALEAHRQIHTGS
DMAIFCLLCGKRFQAQPALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTAGDHP
YECEFCGSCFRDENTLKGHKRIHTGEKPYECNGCGKRFSLKHQLETHYRVHTGEKPFECK
LCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQKHMKGHRPEDIPPDWRIEK
TYLYLCYV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggatttgactaaaattggtatgatccagctccagaaccccaaccaccccacggccctg
ctgcagaaggccaaccagatgcgtctggcaggaaccctctgcgacgtgatcatcatggtg
gacagccaggagttccatgctcaccggactgtgctggcctgcaccagcaagatgtttgag
atcctgtttcaccgcaacagccagcattacaccctggactttctttcaccaaagaccttc
cagcagatcctggagtatgcctacactgccacactccaggccaaagtggaagacctggac
gacctactgtacgcagcagagatcctagaaatcgagtacctggaggagcaatgcctcaag
atcctggagaccatccagtcctcggacgacaacgacacagaggtcaacatgaacgatggg
ggcacagaggaagacgatgagcgcaagggcaggcaaggagggaagaacgccaagaagcat
tccatggaggggagttaccattcagccgcccaacaagcctcggccctggccagcatggtg
gaccagagcccctccgtctccacatccttcgggctctccaccatgagcccaaccaaagct
gccgtggacagcctgatgagcataggccagtccctcctgcagcagggctttgggggtgag
cacctgactcatggcaactcccaccaccaattgatgaccgagatcaagacggagatgatg
caagtggacgaaggcggaggccacgagagccccagaaccatggagtccagcgcctccagc
aattgcgaaaggagcggcgagttggacaagaaccgtgacggccccgggaccccaaccagg
agcagcgtgatcacgagcgcccgcgagctgcactacgtccgggaggatggcatgggcgac
ccccaagcagatggcggccaaatgggtctggaagccatggcgggtatgacaggcatgacc
gagaaacacctggcctccttgtactctctgcctcccaatcataaaaatgaggccatgcta
tccatgccggcctccatggcctcttctctccatatgtcccctgccctggccatgtccatg
gacttcagtgcctatgggggacttctgccccagagcttcatccagagggagttcttcaac
aagttgggggagctggctgccggtatgaagccagatggcaggaaccagcatgaacgctgc
aacgtgtgtggcgcagagctaccagacaacgaagctgtggagcaacacaggaagctgcac
agcggaatgaagacctatggatgtgagctttgtgggaaacgctttctggacagcctacgc
cttaggatgcacttgctgtctcactcagctggtgagaaggccattgtctgtgaccagtgt
ggggcccagttccagaaggaggatgctctggaggctcacagacagatccacacaggctcg
gacatggccatcttctgcctgctgtgtgggaagcgcttccaggcgcagccggcgctgcag
cagcacatggaggtccacgccggtgtgcgcagctacatctgcagcgagtgcaaccgcacc
ttccccagccacacggcactcaaacgccaccttcgctcgcacacagcaggtgaccatccg
tatgagtgcgagttctgcgggagctgcttccgtgacgagaacactctaaagggccacaag
cgcatccacaccggggaaaagccctatgaatgtaacggctgtggtaagaggttcagcctc
aagcaccagctggagacccactaccgtgtgcacacaggtgagaagccgtttgagtgcaag
ctgtgccaccagcgatccagggactactcggccatgataaaacacctgcgcacccacaat
ggcgcctcgccctaccaatgcaccatctgcctggagtactgccccagcctctcagccatg
cagaagcacatgaagggccacaggcccgaagacatccccccggactggaggatagagaag
acctacctgtacctctgctacgtctga
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