Coregonus clupeaformis (lake whitefish): 121580586
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Entry
121580586 CDS
T08357
Name
(RefSeq) phakinin-like isoform X1
KO
K10379
phakinin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121580586
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Others
121580586
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
CCDC22_CC
FKBP15
Alpha-2-MRAP_C
AAA_13
Laminin_II
WEMBL
TolA_bind_tri
ATG17_like
Sec8_N
Baculo_PEP_C
DUF1664
DUF3450
DUF7310
Rod_CreS
ANC1_spectrin
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
121580586
NCBI-ProteinID:
XP_041751481
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All DBs
Position
14:complement(931714..939295)
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AA seq
439 aa
AA seq
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MPLPRRRSSFLSQPAAKERPGSANTRVGTTGISNAPRGVFVGTAPMVAASSMGTRVSRRA
LGISSVFLQGLRTTVAPVMPHGAGTSGRQHPGGAESLNGCLMEYRDKVRALEQLNQQLEE
QIKHCLDRKSSSAGAWGPLRQEWEDVYRHVSESILHTARLMLQTENVQANAEDFKDRYED
EQPFRKAVEEEIGSLYKVIDDANMTKSDLESQMDSMRAELRDLACSHEEDVRVLYKQMVG
GEVDEPDTPIETNLDQILAYIRSHWERVIEKNRAETDAYLEYKQAESVGSNLSREEEELE
SLKTECNDAGCKIQSLQAQTESIRALKRGLENSLNDATHWHDIELQNLASVIGKLESELG
DVRGDVEQQRRDYETLLGNKMRLELEIGTYHCILDGEERRYHPSMCTGASEPEGKQTLLP
PHSEPSGSPELQGSNTSSP
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgccgagacgtcgatcctccttcctgagccaacctgccgccaaggagcgccca
ggtagcgccaacaccagggttggcaccacaggcatcagcaatgccccccggggtgtcttt
gtcgggacggcccccatggttgccgcctccagcatgggcacgcgtgtgtcgcgacgcgcc
ctaggcatcagcagtgtgttcctgcaggggctgaggaccacggtcgcgcctgtgatgccc
cacggggccgggaccagtggcaggcaacaccccgggggcgctgagagcctcaacggatgc
ctgatggagtacagggataaggtgcgagccctggagcagctcaaccagcagctggaggag
cagatcaaacactgcctggatcgtaagtcatccagcgccggagcctggggccccctcaga
caggaatgggaggacgtctacagacatgttagtgagtccatccttcacactgccaggcta
atgctgcagacagagaatgtgcaggccaacgctgaggacttcaaggaccggtatgaggat
gagcagcccttcaggaaggcggtggaggaggagatcggctctctgtacaaggtgattgac
gatgccaacatgaccaagtcggacctggagagccagatggacagcatgagggctgagctt
cgggacctggcctgcagccatgaggaagacgtgagggtgctctacaagcagatggtaggc
ggcgaggtggacgagccggacactcccattgagaccaatctggaccagatactggcttac
attcgctcccactgggaaagagtcatcgagaagaaccgtgccgagaccgatgcctacctg
gaatacaagcaggcagagagtgtgggcagtaatctgagtcgtgaggaggaggagctcgag
agtctgaagacggagtgtaacgatgctggctgtaagatccagagtctgcaggcccaaact
gagtccatcagagcactgaagcgcggtttggagaactcgctgaacgacgccacgcattgg
cacgacatcgagctgcagaacctggcatccgtcattggcaagctggagtcggagctgggc
gacgtccgcggcgacgtcgaacagcagcgccgcgactatgagacgttgctgggcaacaaa
atgcgtctggagctggagatcggcacctaccactgcatcttggatggggaggagagacgc
taccacccttccatgtgcacaggtgcatcagagccagaggggaaacaaaccctccttcct
ccccattcagagccctccggtagcccagaactccaaggctccaacacatctagtccctag
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