Coregonus clupeaformis (lake whitefish): 121581181
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Entry
121581181 CDS
T08357
Name
(RefSeq) glutamate decarboxylase 1-like isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00250
Alanine, aspartate and glutamate metabolism
cclu00410
beta-Alanine metabolism
cclu00430
Taurine and hypotaurine metabolism
cclu00650
Butanoate metabolism
cclu01100
Metabolic pathways
Module
cclu_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
121581181
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
121581181
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
121581181
00430 Taurine and hypotaurine metabolism
121581181
Enzymes [BR:
cclu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
121581181
BRITE hierarchy
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
Chlam_OMP3
Motif
Other DBs
NCBI-GeneID:
121581181
NCBI-ProteinID:
XP_041752549
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All DBs
Position
14:complement(15669181..15703859)
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AA seq
588 aa
AA seq
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MATSEPTAAGGDQDPNSANLRPSSTNYDAWMQGCTRKLGMKICGFLQKNNSLGEEGRLAG
SLSERQKNLFSCVNSDRDARFRRTETDFSNMFARDLLPTKNGEEATMQFLLELVDILTNY
VRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDQPESLEQILVDCRDTLKYGVRTGHPRF
FNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREMIGWPSGEGDGI
FSPGGAISNMYSVMIARYKYFPEVKTKGMSAAPRLVLFTSEHSHYSIKKAGAALGFGSEN
VVLLSTDERGRVIPSDLEAKILNVKQKGYHPLFVNATAGSTVYGAFDPINEIADICEKYN
MWLHVDGAWGGGLLMSRKHRHKFSGVERANSVTWNPHKMMGVPLQCSAILVREKGILAGC
NSMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTIGFEQHIDKCLDLS
QYLYDKIRNREGYEMVFEGVPQHTNVCFWYIPPSLRGMEHNSEEYREKLHKVAPNIKAMM
MESGTTMVGYQPQGQKVNFFRMVISNPAALQSDIDFLIDEIERLGHDL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtctgaaccgacagccgccggcggggaccaggaccccaactccgccaattta
cgaccttcatccacaaactatgacgcgtggatgcaaggatgcacgcggaaactggggatg
aagatatgtgggttcctgcagaagaataacagtctaggggaggaaggccggctcgcaggc
tcgctttcagaacgccagaagaaccttttctcctgtgttaacagcgaccgggatgcgcgc
ttccgccgcactgagaccgatttctccaacatgttcgcaagagacttacttcccaccaaa
aatggagaagaggcgactatgcagttcttgttagaacttgtggacatcctcaccaactac
gtcaggaagacgtttgaccgttccaccaaggttctggacttccaccaccctcaccagctg
ctggaaggcatggagggcttcaacctcgagctctctgaccagccagagtcccttgagcag
atccttgtggactgcagagacacgctcaagtacggcgtgcgaacaggtcatccacggttc
ttcaaccagctctccactgggctggacatcattgggctggctggggagtggctcacctct
acagccaacacaaacatgttcacctatgagatcgctccagtgtttgtcctgatggagcag
ctgacgctgaagaagatgagagagatgattggctggccctcaggagagggggacggcata
ttctcaccagggggcgccatctctaacatgtacagtgtgatgatcgctcgctacaagtac
ttccccgaggtcaagaccaagggcatgtctgccgctccccgcctggtgctcttcacatca
gaacatagccactactctatcaagaaggcaggggcagctctgggctttggctcagagaac
gtggtcctgctgagcacagatgagagggggagagttattccttctgatctagaagctaag
atcctcaatgtcaagcagaagggttatcatccactgtttgtgaacgctacagctggttcc
actgtttacggagcatttgaccccatcaacgagatcgctgacatctgcgagaaatacaac
atgtggttgcacgtagacggtgcatggggaggtggtctcctgatgtccaggaagcatcgc
cataagttcagcggggttgagagggctaactctgtcacgtggaaccctcacaagatgatg
ggagtgcctctacagtgctccgccatcctggtcagagagaagggtattctggctggctgt
aactcgatgtgtgcagggtacctgttccagcctgataaacagtatgatgtcagctatgac
acgggtgacaaagccatccagtgtgggcgccacgttgacatctttaagttctggctcatg
tggaaggccaagggcaccataggatttgagcagcacattgacaagtgtctggacctgtct
cagtacctctacgacaagatcagaaaccgagagggatacgagatggtgttcgagggagtg
ccccagcacaccaatgtgtgtttctggtacattccacccagcctgagaggcatggaacac
aacagcgaggagtatcgagagaaacttcacaaagtggcacccaatatcaaagcaatgatg
atggagtctggtacgaccatggtgggctaccagcctcagggccagaaggtcaacttcttc
cgcatggtcatctccaaccctgcagccctccagtcagacatcgacttcctgattgacgag
atcgagaggctggggcatgacctgtag
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