Coregonus clupeaformis (lake whitefish): 121582730
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Entry
121582730 CDS
T08357
Name
(RefSeq) semaphorin-4D isoform X1
KO
K06521
semaphorin 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cclu04090
]
121582730
CD molecules [BR:
cclu04090
]
Proteins
121582730
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GFIT
Motif
Pfam:
Sema
PSI
ig
I-set
Ig_3
Ig_2
Motif
Other DBs
NCBI-GeneID:
121582730
NCBI-ProteinID:
XP_041754721
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Position
15:54348427..54477645
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AA seq
957 aa
AA seq
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MKCLIFKNFVQLFPEQFHKEWVTPHIEAEYKLQGLHLSGGTSHDNDALLGSGGNFTVPKL
LPESNMAFGVLGVFLGLLLEVSTHGPHSVPRTSWKHEELKFVEFSEPGIFNYSTLLLSED
KDVLYVGAREAIFELSMTNVSIKNNKVQWKVPETHMTMCILKGKSKETDCLNYIRVLQVL
DDNRLYVCGTHAFQPVCHYLSLKDFSLEGPSEDGRGKCSFDPSQSFTTVMVDGELYSGTS
YNFLGSEPIISRYSLSQSLLRTEYSTSWLNEPSFVFADVIREGKNSADGEDDKIYYFFTE
VSVEYEFFGKLLIPRIARVCKGDLGGQRTLQKKWTSFLKAKLVCSMPELNFVFNVVHDVF
ILKAPDWRETVIYGVFTSQWGNVGLSAVCAYNMSSVDEVFSKGKYMQKATVEQSHTKWVR
YNGITPTPRPGACINNHNRLQNINNSLHLPDKTLQFVKDHPLLEDPVLPIGNRPKLITKD
VNYTQIAVERVQALDNNVYDVIFTGTDKGVLHKSVLYEGEVHTVEEIQLLHNSEPIKTLL
LSSQGTRSLYAGSDSGVVQSPTAFCDKYLACSDCILTRDPYCAWDPDTSACVNIFHTQGL
THRNLIQSLNGDADKCPSVPGLAVEGYQRVTVKPGSSAKLPCLIQSNLAMVVWKVNGKTL
TEASKFYLIGETGLLIYSVAPEDQGLYECWSLEWAPVAGKNFSSLLAGYALDLDVPRRPS
PRGHLPQSAITLSSAHPNHQSTATTEGNNGNTGRSFPLTSAPPSSTALTSPPPHSASSSL
TMPPSSSTVRLQPKLLSPSSSGTPLPETPDPATEYLQHDNSSTLLFLFLLFFLLFLAALA
YNCYMQYLPGPCLRLRAALLGSHKNPQPEYIACETGLMEPVTAEKLDLMDQIHLNQNGAQ
PRALRETGYETEPECDNGRIPSHSYAGDGSASKEMPFDVDCDSQPIEYADADLDASP
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtctgattttcaagaattttgtccaactctttcctgagcagttccacaaagag
tgggtcactccacacatcgaggcagaatacaaactacagggattgcatctcagtggggga
acgtctcatgataacgatgcgcttcttggcagcggaggaaacttcacggttccgaagctg
ctcccagaatccaacatggcatttggagttctaggtgtgttcctgggtctactactcgag
gtctctacacatggaccccacagcgtgccccggacctcctggaaacatgaagagctcaaa
tttgtggaattttctgagccgggaatcttcaactattccactctgttgctgagtgaggat
aaggatgtgctctacgttggcgcgagggaggccatctttgaactcagcatgaccaatgtg
tcaatcaagaacaacaaggttcaatggaaggtcccagaaacccatatgacgatgtgcatc
ttaaaaggaaaatctaaagagactgactgtctaaactacatccgggtgttacaagtgttg
gatgacaacagactgtatgtctgtgggacacatgcttttcagccggtctgtcactacctg
tccctaaaggatttcagtctggagggtccatcggaggacgggagagggaagtgttctttt
gacccatctcagagtttcactacggtcatggttgatggagaactttactctggaacatca
tataacttcctaggaagtgaaccgatcatctccagatattctctttcacaaagtctgtta
cgaacagagtattcaacatcttggctcaatgagcccagttttgtttttgctgatgtcatc
cgagaggggaagaacagtgcagatggcgaggacgataagatctactacttctttaccgag
gtgtctgtggagtacgagttctttggcaagcttctcatccccaggatagcacgtgtctgt
aagggtgatctaggtggccagcggacgctacagaagaaatggaccagtttcctgaaggcc
aaactggtgtgttccatgccagaactaaactttgtcttcaatgtggtccatgacgtgttc
atactgaaggctcctgactggagagagacagtcatctatggcgtcttcacatcccagtgg
ggtaatgtaggcctgtctgcggtgtgtgcctataacatgtcatcagtagatgaggtcttc
tctaaggggaagtacatgcagaaagccacagtggaacagtcacacaccaagtgggtgagg
tacaacggtatcacccccacccctcgcccaggagcttgcatcaacaaccataaccgtctc
cagaacatcaacaactctctccacctgcctgataagacactacagtttgtaaaggaccat
cctctactggaggacccggtcctccccatcggcaacaggcccaaactcatcaccaaggat
gtcaactacacccagatcgccgtggagagggtacaggccctggacaacaatgtgtatgat
gtcatattcactgggacagataaaggagtcctgcacaaatcagtgttgtatgaaggagag
gtccatacagtggaagagatccagctactccacaactctgagcctatcaagaccttgctt
ctgtcatcacaagggacgagatccctgtatgctggctctgactcgggggtggtgcagtct
cctactgcgttctgtgacaagtaccttgcctgttcagactgcatcttgacccgggaccct
tactgtgcctgggacccagacacctccgcctgtgtcaacatcttccacacccagggcctc
acacaccggaacttgatccagagccttaacggtgatgcagacaagtgtccctcagtgcct
ggccttgctgtggagggctaccagcgtgtgactgttaaaccagggagctcagcaaagctg
ccgtgcctcattcagtccaatctggccatggtggtctggaaggtgaacggaaaaaccctg
accgaggcctccaagttctacctgataggggagacgggtctgctcatctacagcgtggcc
ccagaggaccagggcctgtacgagtgctggtccctggagtgggcccccgtggcaggaaag
aacttcagtagcctcctggctggatatgcccttgatctggatgtccccaggaggccgtca
cccagaggccacctccctcagtccgccatcacccttagctccgcccaccccaaccaccag
tccaccgccaccactgaaggtaataacggtaacaccgggagatccttcccactaacttca
gcccctcccagctccaccgccctcacctcaccacccccccacagtgcctcgtcatcacta
accatgcccccgagcagcagcactgtcaggctccagcccaagctcctctcccccagctct
agcggcaccccactcccagagaccccggacccggcgacagagtacctccaacacgacaac
agcagcactctgctcttcctcttcctcctcttcttcctgctcttcctggcagccctggcc
tacaactgctacatgcagtatctgcctgggccatgtctccgtctgcgtgcggctctgctg
ggaagccacaagaatccccagcctgagtacatagcatgcgagaccggcctcatggagcct
gtcacagcagagaagctggacctaatggaccagatacacctgaatcagaacggggcacag
ccccgagcgctgagggaaactggctacgagacagagccagagtgtgacaatggcaggatc
ccctctcacagctacgcgggggacggaagtgcttctaaagagatgccctttgacgtggac
tgtgactcgcagcctattgaatatgcagacgcagatctagacgcatcaccgtaa
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