Coregonus clupeaformis (lake whitefish): 121582795
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Entry
121582795 CDS
T08357
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121582795
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
121582795
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Dna2_Rift
Motif
Other DBs
NCBI-GeneID:
121582795
NCBI-ProteinID:
XP_041754831
LinkDB
All DBs
Position
15:complement(47660279..47680811)
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AA seq
395 aa
AA seq
DB search
MMVHCAGCDRPILDRFLLNVLDRAWHAKCVQCCECHCNLTEKCFSRDGKLYCKIDFFRRF
GTKCAGCLQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKEDYL
SSGAIKEVNLNSVSSCTDRSLSPDLQDPIQDDTKETDNSMSSDKDMNNNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRGPRRMRPLGGRLEEPDILGPGAYGYYTEYQGDYYGAGGNYDFFPHGP
PSSQAQSPAESPYIHGGAMEGSVSAHHPSDDQRFTDMISHTDTPSPEPGLPSSLQPVPGE
AYGGGPSPPFSLASNSSYSAPMSHPGQEMGETTVW
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgatggtccactgcgcggggtgcgacaggcccatcctggaccggttcctgctcaacgtg
ttggaccgagcctggcacgccaagtgcgtccaatgctgcgagtgccactgtaacctgacc
gagaagtgcttctcgcgggatgggaagctctattgtaaaattgactttttcaggaggttt
gggacgaagtgcgcgggctgcctccaaggcatctctcccagcgatctggtgcgcaaggcg
cgcagcaaggtgttccatctcaactgcttcacgtgcatggtgtgcaacaagcagctgtcc
accggcgaggagctctacgtcatcgacgaaaataagtttgtgtgcaaagaagactaccta
agctcaggggctatcaaggaagtcaatttgaattcagtgtcatcatgcacagacagaagt
ttatcgccggacctccaggacccgatacaggacgacacaaaagagacggacaattccatg
tcctcagataaggacatgaacaataacgagaatgaggagcagaattcgggcacgaagcgg
cgaggcccacggaccaccatcaaagccaagcagctggagacgctgaaggctgccttcgtg
gccacgccgaaacccacccgacacattcgggaacagttggcccaggagacgggactcaac
atgcgggttatacaggtatggttccagaaccgtcggtctaaggagcggaggatgaagcag
ctgagtgctttaggggcgcggcggcacgccttcttcagagggccccggaggatgaggccc
ctggggggacgactggaggaaccagacatactggggcctggggcctatggatactacaca
gagtaccagggcgactactatggagcagggggaaactacgacttcttcccccacggccct
ccctcctctcaggctcagtctccagcagaatccccctatatccatggaggggccatggag
ggctctgtgtcagcccaccacccctctgatgaccagaggttcacggacatgatctcccac
acagacacccccagccccgagcccggcctgcccagctccctgcagcccgtccctggagag
gcgtatggaggggggcccagcccacctttctccctggctagtaactctagctacagcgcc
cccatgtcccaccccggacaggagatgggagagaccaccgtctggtag
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integrated database retrieval system
