Coregonus clupeaformis (lake whitefish): 121584502
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Entry
121584502 CDS
T08357
Symbol
traf1
Name
(RefSeq) TNF receptor-associated factor 1
KO
K03172
TNF receptor-associated factor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121584502 (traf1)
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Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-RING_UBOX
DUF1664
Motif
Other DBs
NCBI-GeneID:
121584502
NCBI-ProteinID:
XP_041756341
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Position
16:15957505..15966901
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AA seq
571 aa
AA seq
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MESSLKPAGNLHSDPSAPGENEYPSGFPQSICDDVPQQKYLCSNCNNVLNEARQTLCGHR
YCLACVSWLVSNNNNLVCKMCKEEDPSSESETSILTSDNLFSDAAINKEILELKVHCANQ
GCSWRSILKDFEEHQGQCEYALIPCNIGCGHMVLRKALACHLEKACPNNMSVCSACCHSM
SPIELQTHSCHSLGEEKADKKQRKGKNNPIPGSKAKEYCVFSEVGCTFKGTTEKLRVHEN
SSHVGHLQLLLRAATTTSSDLQASPLTAPASGKEENRAMDEQLPHLREALSGLTLHWDMG
LSRGDGELETEGGDGRDSSAAHSLRDDDQVTILLDLGRQIDTLQQRVQISENIISVLNRE
VEKTQLSMEAVERENQSNQEMIYHLEIKVTEQEHRMARKELVISSLKQSLSAHQEVSYDG
TFIWKLSDLSSKMKEAVSGHGNRPNLYSPAFYTARYGFKVCMRLYLNGDGVGKGTHISLF
FVIMKGEYDLLLSWPFKHKVTFFLLDQNHREHVIDAFRPDLTSSSFQRPVSEMNVASGCP
LFFPLGKLRSPKHAYLKDDTIFIKCVVDTSS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggagtctagtttaaaaccagctggcaacttacacagtgatccatctgcaccaggtgaa
aatgagtatccttctggatttcctcaaagtatttgcgatgatgtaccccagcagaagtac
ctgtgcagcaactgtaataacgtactgaatgaggcacgtcagactttgtgtggccaccgc
tactgcctcgcttgtgtcagttggttagtgagtaataacaacaaccttgtttgcaagatg
tgcaaagaagaagatccaagctcagagagtgaaacaagcatactgacatcagacaattta
ttcagtgatgcagccatcaataaggagatcttggagttgaaagtgcattgtgctaaccaa
ggttgctcctggaggagtattctcaaggactttgaggagcaccaggggcagtgtgagtat
gccctaatcccctgcaacataggctgtggtcacatggtgttgcgaaaggccttggcctgc
cacctggagaaggcctgtccaaacaacatgtcagtgtgctccgcatgctgccactctatg
agccccatagagctacagacacactcatgtcacagtcttggggaggaaaaagctgataaa
aaacaaaggaaaggaaagaataatcctattccaggttccaaggcaaaagagtattgtgtt
ttctctgaagttggttgcacatttaaggggaccacagagaagctgagagtgcatgagaac
agtagccatgttggccaccttcagctcctgctgcgtgccgccaccaccaccagcagtgac
ctgcaggcctccccactaacagcccctgcctcaggcaaggaggagaacagggctatggat
gagcagctgccccatctcagagaggctctgtctggcctgacactgcattgggacatggga
ctgtcaaggggggatggggagctggagacggaaggaggggacggaagggatagctcggca
gctcacagcctgcgagatgatgatcaggtgaccatcctcctggacctagggcgacagata
gacacactgcagcagagggtccagatatcggagaacatcatctccgtcctgaacagggag
gtggagaagacccagctgagcatggaggctgtggagagggagaaccagagcaaccaggaa
atgatttatcacttagaaataaaggtgacagagcaggagcatagaatggccaggaaggaa
ctggtcatcagctccctgaaacaaagtctcagcgcccaccaggaggtctcttatgacggg
accttcatctggaagctgtctgacctcagctccaaaatgaaggaggccgtctctggccat
gggaatagaccaaacctgtactctccagcattctacacagccaggtatggattcaaggtg
tgcatgaggctgtacctgaatggtgacggggtgggaaagggcactcatatctctcttttc
tttgtgatcatgaaaggggagtatgacctacttctctcatggccattcaagcacaaggtc
actttcttcctgcttgatcagaatcacagagaacatgtgattgacgccttccggcccgac
ctaacctcatcatccttccaaaggcctgtctcagaaatgaatgtggccagtggttgcccg
cttttcttccctcttggtaaacttcgctcgcccaagcatgcgtacttgaaagacgacaca
atcttcatcaagtgtgttgttgacacttcatcctga
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