Coregonus clupeaformis (lake whitefish): 121584872
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Entry
121584872 CDS
T08357
Name
(RefSeq) huntingtin-interacting protein 1-related protein isoform X1
KO
K20040
huntingtin-interacting protein 1-related protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121584872
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
121584872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
121584872
NCBI-ProteinID:
XP_041756995
LinkDB
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Position
16:complement(32800436..32840766)
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AA seq
1070 aa
AA seq
DB search
MNSVGRVPSRVKTKRTETNLGAEREHFDKQQLSSISKAINSNEAPVKEKHARRIILGTHR
EKGAFTFWSYALGLPLSRNSILSWKFCHVLHKVLRDGHHNSLQDCMRHHSSIVEMGQLWG
NLHDKYGQLVALYSKLLCTKMEFHMKHSEIRSNLEVTDEVLERVAGTDVNNVFQLTVKVF
DYLDAELRLAETVIRQLNTSIAISTTTSGQCRLSPLIQVIQDCSHLYHFTVKLLFKLHAC
LPADTLQGHRDRFHDQFHSLKTFFNKARDMLYFKRLIQIPKLPESPPNFLHAASLAKHAR
PVVVIPDEDEPEQQDDDDDDDPEPLINVSDVTMPSMMVPQRFDIFDQTFGPANGGFDDRD
IQIENLQQDLELLRADLERVKGEAQRYVTQLKSQINSLEAELEEQRVQKQHALVENEQLR
MELEATRRRNAEHESVQATFGEAETRAQATEQRYTKLKEKHTELVSSHAELLRKSADTVK
MLSATQQTQEEVVRTKQQLAFEVERIKLDADMKLEEQKFEIKKLKRDFEEKRAEVEHVKG
TLQHNEKVGEQLTSSMLALQAEKERLMRSASEKEVELSFLSQAAQLQQSTLQQERERSTR
EMGELQGKLQEKSRREVQLQQKLLDEQFSLLQGTVSEAESIIQDAVAKLDDPLHIRCTSS
PDYLVSRAEATLGSIDKLKKGHSDYLTNMGDAGGLLRALTHFSHLAADTIINGSATAHLA
PTDHSDRLTENCRGCATQSLQFLKDLKSKASLQRADPASIRIVVQKILRLGEELRPKGMD
VRQDELGDLVDKEMATTSAAIEEAVRRIDEMMNQARMDTSGVKLEVNERILYSCTDLMKA
IHLLVLTSTDLQKEIVEGGRGAATIKEFYARNSRWTEGLISASKAVGWGATQMVESADKV
VLHTGKYEELIVCSHEIAASTAQLVASSKVKADRNSTKLTALQQASRHVNEMAANVVAST
KTGQEHLEDKDTMDFSGMSLIKLKMEEIESQVKVLELENQLGNERLRLGELRKKHYDIAG
VPAADLSEGNGLAPSPAAVAPSSPKPSKPSVMMKPALAQKPNLPPKNMFR
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgtaggacgggtgccttcaagagtgaaaaccaaaaggaccgaaaccaattta
ggtgcggagagggaacattttgacaagcagcagctcagcagcatcagcaaagccatcaac
tccaacgaggcgcctgtgaaagagaaacatgcacgccggataattctggggacccacagg
gaaaagggggcctttaccttctggtcctacgccttgggcctccctttgtccagaaactcc
atcctcagctggaagttctgccatgtgcttcacaaagtgctgcgggacggccaccataac
agccttcaggactgcatgagacatcacagtagcatagttgagatggggcaactatggggc
aaccttcatgacaaatatggacagctggtggctctgtactctaagctcctctgcacaaag
atggagtttcacatgaagcattctgaaatccgatccaacctagaggtgacagatgaggtt
ctggagcgtgttgcaggaacagacgtcaataatgtgttccagctcactgtgaaagtgttt
gattacctggatgcagagttgaggctagctgagacagtgatccggcagctcaacacgtcc
attgccatctctaccacaacgtcaggccagtgtcgtctgtcccccctcatccaggtcatc
caggactgcagtcacctctaccacttcaccgtcaagctgcttttcaagctgcatgcctgt
ctcccagcagacaccttgcaaggacaccgtgatcgttttcatgaccagttccacagcctc
aagaccttcttcaacaaagccagagacatgttgtacttcaagagactcatccagatcccc
aagctgccagaatcccctcctaacttcctgcacgcggcctccctggccaagcatgcgagg
ccggtggtggtcatcccagacgaggatgagcccgagcagcaggatgatgacgacgatgat
gaccctgaaccgcttatcaatgtcagcgatgtcaccatgcccagcatgatggtgccacag
cggtttgacatttttgatcagaccttcggacccgccaatggtggttttgatgacagggat
atccaaattgagaacctccagcaggacttggagttattgagggcagatctggaaagggtc
aagggagaggcccagcgctacgtcacgcagctcaagtcccagattaacagtcttgaggcg
gagctggaggagcaacgggtgcagaaacagcacgccctggtggagaatgaacagctgcgc
atggagctggaggccacgcggcgccgcaacgctgaacatgagagcgtgcaggccaccttc
ggagaggcagagacaagagcccaggccacagagcagcgctacaccaagctgaaggagaag
cacactgagctggtgtccagccatgctgaactgctcaggaagagtgcagacacagtgaag
atgctgtcggcaacacagcagacccaggaagaggtggtgaggaccaagcagcagcttgct
ttcgaggtggagcgcatcaaactggacgctgacatgaagcttgaggagcagaagtttgag
attaagaagcttaaaagggattttgaggagaagagggctgaggtggaacatgtcaaaggc
actctgcagcacaacgagaaggtgggggaacagctgaccagctccatgttggcgctgcag
gcggagaaagagcgcctgatgcgctctgcgagtgagaaggaggtcgagctgtcattcctg
agccaggctgcacagctgcagcagtctactctgcagcaggagagagagcggagcaccagg
gagatgggagagctgcagggcaagctgcaggagaagtctagacgtgaggtgcagttgcag
cagaagctgctggatgagcagttctccctgctgcagggaacggtctctgaggctgagagc
atcatccaggacgctgtggccaagctggacgaccccctgcacatccgctgcaccagctcc
ccagattacctggtcagtcgggcagaggccactttgggctccattgataaattgaaaaaa
ggtcactcggactacctgacgaacatgggagatgctggtgggctgctgagggccctgacc
cacttctcccacctggctgctgacaccataatcaacgggagtgccacagcacacttggct
cccaccgaccactctgaccgtctgacagagaattgcaggggctgtgccactcagagtctg
cagttcctgaaggatctcaagtccaaggcctcccttcagagggcagacccggcctccatt
cgcatagtggtccaaaagatcctgaggctgggggaggagctgcgacctaaaggcatggat
gtgcgacaggatgagttgggagatctggtggacaaggagatggcaaccacgtcagcagcc
attgaggaggcagtgcgcagaatcgatgaaatgatgaaccaggcccgaatggacacctcg
ggggtcaaactcgaggtcaatgagagaatcctctacagctgcacagacctgatgaaggcc
atccacctgctggtcctgacatccaccgacctacagaaggagattgttgagggcggaagg
ggtgcagccactattaaggaattctacgccaggaactcccgttggactgagggactcatc
tctgcctccaaagctgtgggatggggagccacacagatggttgagtctgctgataaggtg
gtgctgcacactggcaaatatgaggagctcatcgtctgctcccacgagatcgctgccagc
acggcacagctggtcgcatcctcaaaggtaaaagcagaccgcaacagtacgaaactgaca
gctctccagcaggcttctcgccatgtgaacgagatggcagccaacgtggtggcctccacc
aagacgggccaggagcacctggaggacaaggataccatggacttctctggaatgtctctc
atcaaactaaaaatggaggaaattgagtcacaggtgaaggtgttggagctggagaatcag
ctgggtaatgagcgtctgcgtctgggagagctcaggaagaagcactatgatatagcaggt
gttccagcagcagacctctcagagggcaacggcctggccccctcacctgccgctgttgca
ccctcctcacccaaaccctccaagcctagtgtcatgatgaaacctgccttggctcagaaa
cccaacttaccacctaaaaacatgttcaggtaa
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