Coregonus clupeaformis (lake whitefish): 121586093
Help
Entry
121586093 CDS
T08357
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04145
Phagosome
cclu04814
Motor proteins
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121586093
09142 Cell motility
04814 Motor proteins
121586093
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121586093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121586093
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121586093
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
121586093
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
121586093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
Dynein_IC2
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EML
Beta-prop_WDR3_1st
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_RFWD3
SNAPC2
Beta-prop_DCAF4
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
121586093
NCBI-ProteinID:
XP_041758499
LinkDB
All DBs
Position
17:25301223..25321835
Genome browser
AA seq
649 aa
AA seq
DB search
MSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKESESLQQKTENVSEDSDLDRKRRET
EALLQSIGISPEPPLVQPLQLLTWDTCYFHYLVPTPMSPSSQSVSTTSDAGSQESVDGGT
VGRYRTLQWDTDPSALQLQADSELGRRMHRLGASKIVQIDFLPKELVTYTKETQTPSAAH
QSEEEEEDEEGTEPKAAPQTDQPEEEGEAEDSKEAHPRELTEEEREQILHSEDFLVFFER
SVSVVERALAEEGDIFFDYSGRDLEDKEGDMQGGSNLSFNRVFHDEHWSKHRVVTCLDWS
PQYPELMVASYNSNEDAPHEPDGIALVWNMKFKKTTAEYTFHCQSSVMSVGFAQFHPNLV
VGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDGKMC
SWSLDMLSQPQESMELVYNKSKPVAVTGMAFPAGDVNNYVVGSEEGMVYSASRHGSKAGI
AEMFEGHQGPVTGISCHNAVGTVDFSHLFITSSFDWTVKLWSTKHNKPLYSFEDNADYVY
DVSWSPVHPALFASVDGMGRLDLWNLNNDTEVPTASVTIEGACALNRVRWASGGREVAVG
DSEGRVWIYDVGELAVPHPEDWSRFARTLVEIRANRGDGEEEGAVELAA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgacctgaaagctgagctggagcgaaagaaacagaggttagctcaa
atacgagaggagaagaagagaaaggaggaggagaggaaaaagaaggagtctgagagtctt
cagcagaagacagagaatgtctctgaagattctgacttggaccgcaaacgaagagagacg
gaagcgctgctgcagagtattgggatctcaccagaaccaccattagtgcagcctctgcag
ctcttaacatgggatacctgttattttcattatttagtcccaacccctatgtctccctct
tcacaatcagtgagcaccaccagtgatgctggcagccaggagtccgtagatggtgggaca
gtgggaagatataggaccctgcagtgggacacggacccctctgctctccagctgcaggcc
gactctgagctggggcgcaggatgcacagacttggagcgtcaaaaatagtacagattgac
ttccttcccaaagagcttgtgacctacactaaagagacccagactccttcagcagcacat
caatctgaagaagaagaagaggatgaggagggcactgagcctaaagctgcccctcagact
gaccagcccgaggaggagggagaggcagaggacagtaaagaggcccaccccagagagctg
acggaggaggagagggaacagatccttcactccgaggacttcctggtcttctttgagcgg
tcggtctctgtggtggagcgggcgctggccgaggagggagacatcttcttcgactacagc
ggccgggacctggaggacaaagaaggggacatgcaaggtggatccaatctgtctttcaac
cgtgtgttccatgatgagcactggtccaaacaccgagtagtcacctgcttagactggtcc
ccacagtaccctgaactgatggtggcctcttacaacagcaacgaggatgctccacacgag
cctgatgggatagcgctggtgtggaacatgaaattcaagaagactactgcagagtatacg
tttcactgccagtcgtcagtgatgtctgtgggctttgctcagttccatcctaacctggtg
gtggggggaacgtactcaggacagattgtgttgtgggataaccgtagtcacaggaggacc
cctgtccagaggacccctctgtctgctgcggcacacactcacccagtgtactgtgtgaac
gtggtgggtacccagaatgccaacaacctgataacagtgtctactgatgggaagatgtgc
tcctggagtctagacatgctctctcagccacaggagagtatggagctggtgtacaataag
tccaagcctgtagcagtaacaggaatggccttccctgccggagatgttaacaactatgtg
gtaggaagcgaggaagggatggtgtactctgcgtcccgccacggcagtaaagcaggtata
gcggagatgtttgaggggcaccagggcccagtgactgggatcagctgccataacgctgtg
ggcactgtcgacttctcacacctcttcatcacatcctcctttgactggacagtcaaactg
tggtcaaccaagcacaacaagccactgtactcttttgaggataatgcagactatgtctat
gatgtcagttggtcccctgtgcatccggctctctttgcctccgtggatgggatgggccgt
ttggacctgtggaacctcaacaatgacactgaggtgcccacagcgagtgtgactatcgag
ggggcatgtgctctgaaccgtgtgagatgggcgtcgggaggcagagaggttgccgtgggt
gactcggagggtcgtgtctggatctacgatgtgggagagctggcagtgccacaccctgag
gactggagccgcttcgcccgcaccctggttgagatccgtgccaaccgcggtgatggagag
gaggagggggccgtggagctggcagcctga
DBGET
integrated database retrieval system
