Coregonus clupeaformis (lake whitefish): 123481138
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Entry
123481138 CDS
T08357
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
123481138
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Other domain-containing proteins
Patched domain-containing proteins
123481138
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
Motif
Other DBs
NCBI-GeneID:
123481138
NCBI-ProteinID:
XP_045077088
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All DBs
Position
7:11050919..11054308
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AA seq
834 aa
AA seq
DB search
MPSCHTDCIEKPVSNWFHKLGGFVGRNPWWFLLVPLFISAGLGAGFYFLEEREAHGIEDQ
FTPKDGPAKKERHFVKEHFPQNDSEFSRLRLYTEGSYGSFIAVSKSSDILSEKAFEEIIY
LDGRVREMGIGHERLTYENLCAMKSNRCFSNYMLDVTNGTASTIKNANLTFPFHNSMFLG
TELGGVVLNSSIIVSAKAVRLSYFLRENNKAENDIWLHGFTQVFSNLSDELNKIQVSYFT
SNSREEELKGNSKSVIPLFSVAYFLAISFSMISCLRLDCVRNKVWVASFGALSAGLAVLS
SFGLLLLCGMPFAMTVATAPFLILGIGVDDMFIMISCWQQTQVHDNVEDRMAATYKDAAI
SITITTLTDALAFYIGLLTPFGSVQSFCMYTGTAVLFCYLYNITFFGAFLALNGRREKGN
RHWLTCMKVPEPEDSPEKYNICCVGGAYDQETGKEEVMPINNFLKMYYGPFLTNTWTKVF
VILLYAGYLGSSIYGCFQIQEGIDLKNLAADSSYVGSYYDNEDQYFSQYGPNVMVVVTDS
EFQYWDETARKRLDTCLRSFESLTLAGQSLVAKDMTLSWLNEYVKAGVVSNPNNETIFMD
SLPTFLQQSGFTQDVNISNKVIIASRLFIQTINVSTAVDEKNMLNKLRETANGCPGKLVV
YHPAFIYFDQYAVIVSNTIQNIVVATLAMLVISLMLIPNPICSLWVTFAIASVIVGVAGF
MALWDVNLDSVSMINLVICIGFSVDFSAHISYAFVSSKEPTANKKAVDAVYHLGYPILQG
AVSTILGVVVLSAAESYIFRTFFKIMFLVILFGVLHGIVFIPVFLTFFGICNIN
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgtgtcacacagactgcattgaaaaaccggtgtcaaattggtttcataaactt
ggaggttttgttgggagaaatccatggtggtttctacttgtccctttgttcatctctgcg
gggcttggggcaggattttacttccttgaagagagagaggcacatggcatagaggaccag
tttaccccaaaggacgggcctgcaaaaaaggagagacattttgtcaaagaacattttcct
cagaatgattcagagttctctcgtttgcggctgtataccgaggggagctatgggtctttc
atcgctgtttcaaagtcatcggatatcttgagtgagaaggcatttgaggagatcatatat
ttagatggaagagttagagagatgggcataggccatgaaagattaacttatgaaaacctt
tgtgccatgaaaagtaacaggtgcttttcaaattacatgttagatgtcactaatggcaca
gctagtacaattaagaatgcaaacttgacctttccttttcataattcaatgtttttgggg
acagaacttggtggagtagttttgaattcaagtatcatcgttagtgcaaaggctgttcga
ctctcctactttctcagagaaaacaacaaggcagaaaatgatatttggctacatgggttt
acacaagtgttttccaacttgtcagatgaattgaacaagattcaagtttcatatttcacg
tctaattctagagaggaggagttgaagggaaactcaaaatctgtgattcctctcttctcc
gtcgcatacttcctggccataagtttttccatgatatcttgcttgaggttggactgtgtg
aggaacaaggtgtgggtggccagctttggtgctctgtctgcaggcctagcagtgctgtcc
agtttcgggttgttgctgctctgtggaatgccctttgccatgactgttgcaactgctcct
ttcttaatacttggaattggtgttgacgacatgttcatcatgatttcctgctggcagcag
actcaggttcatgacaacgtagaggaccgtatggcagctacatacaaagacgcagctatc
tctatcaccatcacaacactaactgatgccctggccttctatattggtctgttaactccc
tttggttctgtacaatccttttgtatgtatactggcacagctgtcctgttctgctacttg
tacaatattaccttctttggtgcatttctggcactgaatggaagacgtgaaaagggcaac
agacactggctgacatgcatgaaggttccagaaccagaggatagtcctgaaaagtacaat
atctgctgtgtaggaggggcatatgaccaggaaacgggaaaagaggaagttatgccaatt
aacaacttcttaaagatgtactatgggccatttctaacaaatacttggaccaaggtgttt
gtgatcctgctctatgctggatatttgggctcaagtatctatggttgcttccaaatccaa
gaaggcattgaccttaaaaacctagcagccgatagctcatatgtgggtagctattatgat
aatgaggaccagtacttttcacagtatggtccaaatgtaatggttgttgtgactgacagt
gagtttcaatattgggacgaaactgctcgaaagcgtcttgatacttgtctcagaagtttt
gagagtctaacgttggctggtcaatcattggttgctaaagatatgaccctttcttggctt
aatgaatatgtaaaagcgggtgtagtttcaaatccaaataacgaaaccattttcatggat
agtttacctacatttttacaacaatcaggtttcacacaagatgtgaatatttcaaacaaa
gtcataattgcctcacgtttgtttattcagacaatcaacgtcagtacagctgttgatgaa
aagaacatgttgaataagcttcgagagacagctaatggttgtccaggaaagttggttgtt
taccaccctgctttcatatactttgaccagtatgcagtcattgttagtaataccatccaa
aacattgtagttgccactcttgctatgctggtgatctccctcatgttgatccccaacccc
atatgttctctgtgggtgacctttgccattgcctctgtcatagtgggtgttgctggtttc
atggcattatgggatgtcaatctagactctgtatccatgatcaatcttgtcatctgcatt
ggtttctcagtggatttttctgctcacatttcctatgcttttgtctctagcaaagagccg
acagctaataaaaaggctgtagatgctgtctatcacttgggatatcccatcttacaggga
gctgtgtctactattttaggagtggtggtgctgtctgctgctgagagctacatcttcaga
accttctttaagatcatgttcctggtgattttgtttggggtacttcatggcatcgttttc
atccctgtgtttctgaccttctttggcatatgcaatattaattga
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