Cyphomyrmex costatus: 108771427
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Entry
108771427 CDS
T11118
Name
(RefSeq) nuclear protein localization protein 4 homolog isoform X1
KO
K14015
nuclear protein localization protein 4
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108771427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccoa03009
]
108771427
Ribosome biogenesis [BR:
ccoa03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
108771427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPL4
zf-NPL4
UN_NPL4
Zn_ribbon_RanBP
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
108771427
NCBI-ProteinID:
XP_018392210
LinkDB
All DBs
Position
Unknown
AA seq
663 aa
AA seq
DB search
MSNIILRVQSPEGTKRIEVLPSDTIFQLYEKVHEAFDLNNFGFNLYKQRSQKEPLASTRS
RTVSGIGLSHGDILYLVPGNGTQLWSAPSTSSASNNTSTESGPLDTANGVTNRSSGSSRS
LPNVVENDIDEQLWKLDGKIQRKRDEKLCRHGARGCCVHCSPLEPFDEIYLKEQNIKHLS
FHSYLRKLTAGVDRGKFIQLDDISCRIKTGCKDHPPWPRGICSKCQPNSITLNRQTYRHV
DNVMFENASLVERFLNYWRSTGHQRIGYLYGRYEVHSDVPLGIRAVVAAIYEPPQESTKD
TIRLLPDEREALVEELGRTLNLRRVGWIFTDLIADDIKKGTVKHVRNIESHFLSAQECIM
AGYFQNRYPNPCRFSPNGYFGSKFVTVCVTGDDKNQVHMEGYQVSNQCMALVRDGCLVPT
KDAPELGYVIESTDKQYVPDVFYKEKDTYGNEVTRLARPLPVEYLLVDVPASTPLTPQFT
FFTDDNITPFPVENRQVDGQVQEFNSLCTYMQQFNSDQFLEATSDFHLLLFIATMDMYPM
KDHMLPLLEAIRNKDKQKALEWAQSEHWATVEQLISVTSTSSRPPQTSSFGNSSRTLPSV
TAEASGGIGVGTEPIANPPPDQALWTCSHCTFLNAADLAVCEMCNLPREDVEEYDEEMMR
ELF
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatattatcctacgtgtgcagtctccagagggtacaaaacgtatagaagtacta
ccttctgatacaatttttcaactttacgagaaggttcatgaagccttcgatttaaataat
tttggattcaatctctataagcaacgaagtcagaaggaaccacttgcatctactcgaagt
agaactgtgtcaggaatcggtctttctcatggagatatactttatcttgtgccaggtaat
ggcacccaattgtggagtgctccatccaccagtagtgcctccaataacacctctacagaa
tcaggcccattggacactgcaaacggagttacaaatcgttcgtctggttcttcacgatct
ctgccgaatgtagtcgagaatgatattgatgagcaattatggaaattggacggcaagatc
cagcgtaaacgcgatgagaaactttgtcgacatggagcaagaggatgttgcgttcactgt
tcacctctggaaccttttgacgagatttacttgaaggaacaaaatatcaagcacctgtct
tttcattcgtatctcaggaagctcactgccggagttgataggggcaagtttatacaatta
gacgacataagctgccgtataaagactggctgcaaggaccatccgccgtggccgcgaggg
atctgcagcaaatgccaaccgaactcaatcactctaaaccgccagacttatcggcatgtg
gacaacgtcatgttcgaaaatgctagtttagtagaacgttttcttaattattggcgcagc
actgggcaccaacgtatcggctatttatacggaagatacgaagtgcattcggatgttccg
ctaggaattagagcagtcgttgcggccatatatgaaccaccgcaggaaagtacaaaagac
acgataagacttctgccggacgagagggaagcgttagtcgaggaattaggccggacactt
aatctgaggagagtcggatggattttcactgacctcatagccgacgatatcaagaaggga
acggtcaaacatgtccgcaatatagaaagtcatttcctatccgctcaagagtgcattatg
gctgggtattttcaaaatcgatacccaaacccctgccgcttctcgcctaatggttatttc
ggctcaaaatttgtaactgtttgcgtcacaggtgatgataaaaatcaagtacacatggag
ggctatcaggtatccaatcaatgcatggcgttggtacgagatggctgtttggtacctaca
aaagacgcaccggaattgggctatgtgatcgagtcgactgataagcaatacgttccggat
gtcttctataaggagaaagatacttatggaaacgaggtaacaagattagcgagacctttg
ccagtagaatatttattggtagatgtacctgcgtccacaccgcttactccacagttcacc
tttttcacagatgataacattactccatttccagtggagaacaggcaggtcgatggacaa
gttcaggaattcaattcattgtgcacctacatgcaacaatttaacagcgatcaatttctg
gaggcaacttctgattttcacttgctccttttcatcgctactatggatatgtatccaatg
aaggaccatatgttaccattgctcgaagctatccgcaacaaggacaagcaaaaggcattg
gagtgggcccaatcggagcattgggcgacggtggagcaactcatatctgtgacctccacg
tcgtcgcgtcctccgcaaacgtcgtctttcggtaacagctcaaggacgttgccttccgta
accgcggaggccagtggaggaataggcgtcggtaccgagccgattgcgaatccaccaccc
gaccaagctctttggacctgttctcattgcacttttcttaatgccgcggatttagcagtt
tgcgagatgtgcaatctgccaagagaagatgttgaagagtatgatgaagagatgatgagg
gagttgttttga
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