Cyphomyrmex costatus: 108773493
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Entry
108773493 CDS
T11118
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108773493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccoa03400
]
108773493
DNA repair and recombination proteins [BR:
ccoa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
108773493
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
ERCC3_RAD25_C
SWI2_SNF2
Rad54_N
Motif
Other DBs
NCBI-GeneID:
108773493
NCBI-ProteinID:
XP_018394826
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MQKIVSEHEERVRKLLSKPFQIPIPGYKLSGRVLGLRLPGPRRPLHDPNEANALIVYSPP
ELSEHDRLKVDLCKQLVHVVVDPILCNVLRPHQREGVKFMYECVTGKRIDNAYGCIMADE
MGLGKTLQCITLLWTLLKQGPEAKPLIDKAIIVAPSSLVKNWYNEINKWLNNMVNTLAID
GGKKADIDTQLIRFMKTYGRCVTPILIISYETFRLHAHVLHQDEVGLVLCDEGHRLKNSE
NQTYQSLMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRRKYETPILRGQ
DAAATDAERKLAQERLSDLVSIVNKCLIRRTSALLSKYLPLKYELVVCIKMGELQTRLYK
NFIQSDSIKRSMEENDNPKKTGSLSALAAITLLKKLCNHPDLIYDKIMEKADGFEKAALL
LPPKYSTKELMPELSGKLMVLDCLLASIKTTTNDKIVLVSNYTQTLDLFEKLCHKRSYNY
VRLDGSMTIKKRAKVVDNFNSSNSNDFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND
DQAMARVWRDGQKKPCFVYRFLSTGTIEEKIFQRQAHKKALSSTVVDQEDDVARHFTIND
LRDLFKLEENTVSDTHAKFKCKRCINGIEVKGPSEQSDCNSDLSDWRHSHNSRHLPDIPL
RQCWASGISFVFHHRSHEQVK
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatagtatccgagcatgaagagagagtaagaaaacttctcagtaaacccttt
caaataccaatacctggttacaaattatctggacgagttcttggattacgtctgccagga
ccacgtagaccattacatgatcctaacgaagccaatgccttaattgtttattcaccacca
gaattatcagaacatgatagactgaaagtagatctatgcaagcagcttgtacacgtagtt
gtagatcctatattgtgcaatgtattacgaccgcatcagcgtgaaggtgtaaaatttatg
tatgaatgtgtaacagggaaacgtatagacaatgcatatggctgcatcatggcagatgaa
atgggtcttggtaaaacactacaatgtataactttgttatggacattgttgaagcagggt
ccagaggctaaaccgctaatagacaaagcaattatagttgcgcctagctctttggtgaag
aattggtacaatgaaattaataaatggttgaataatatggtcaacactcttgctatagat
ggagggaagaaagcagacattgacactcaactcatccgttttatgaaaacttatggcaga
tgcgtaactcccattctcattataagttatgaaacatttcgtttacatgcacacgtcctg
catcaagatgaagtaggccttgtattatgtgatgaaggtcaccgcttaaagaattctgaa
aaccagacgtatcaatccttgatgggtttgaaagctaaaagaagggtgttacttagtgga
acgcccatacaaaatgatcttttggaatacttttccctcgtacactttgttaatcaagga
ttattaggaactgcacaggaatttcgaaggaaatatgagacgcccatattacgtggccaa
gacgcggctgcaacagacgcagaacgtaaactcgctcaagagcgtttatctgatttagta
tccattgttaataaatgtctgattagacgtactagcgctttactttcgaaatatttacca
ctaaaatacgaactcgtggtatgcataaaaatgggagagctgcaaacacggctgtataag
aattttatacaaagcgatagtataaaaagatctatggaagagaatgataatccaaagaaa
actggcagtctatctgctttagctgccataactcttttaaagaagctatgcaatcatcct
gacttgatatatgataaaatcatggaaaaggcagatggattcgaaaaagctgcattattg
ttaccaccaaaatactctacaaaagagctaatgccagaattgtcgggcaaactgatggtt
ctagattgtcttctagcgtctattaaaactacaaccaacgacaaaatagtacttgtatcc
aattacacgcagactctcgatttgtttgagaaactgtgccataaacgttcctataattat
gtgaggcttgacgggtcgatgacgattaagaaaagagcgaaagtagtcgacaattttaac
agtagcaacagcaacgatttcatctttatgctcagttcgaaagctggtggatgtgggtta
aatcttataggtgcaaatcgtctcgtcatgttcgatccagattggaatcctgcaaacgat
gaccaagcgatggccagagtgtggagagacggtcagaagaaaccatgcttcgtttatcgc
tttctttctactggaacgatagaagagaaaatttttcagagacaagcccataaaaaagca
ttgagttccacggtggttgatcaagaggacgacgtggcgagacattttaccataaatgat
ttgcgcgatttattcaaattggaggagaatactgtttctgatacacatgcaaaattcaaa
tgcaaacgttgtattaatggcatcgaggtgaaaggtccttcagagcaatccgattgcaat
tccgatctgtctgactggcgacattcgcataattcacggcatttaccggatataccgtta
cgacaatgttgggctagcggtatttcgtttgtttttcatcatcgttcccatgaacaagta
aaatga
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