Cyphomyrmex costatus: 108776858
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Entry
108776858 CDS
T11118
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108776858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccoa03032
]
108776858
Enzymes [BR:
ccoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108776858
DNA replication proteins [BR:
ccoa03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
108776858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
Motif
Other DBs
NCBI-GeneID:
108776858
NCBI-ProteinID:
XP_018399091
LinkDB
All DBs
Position
Unknown
AA seq
1464 aa
AA seq
DB search
MDDSQASTSGRSRRQKIDKTGRLSALERLKEARTGSKRKYEIEELENVYDEVDEKEYSNT
VLKRQRDDWIVDDGESGYIEDGREIFDDDLDEESIQEARKQKNNMAGPRKRKKEDNKKKG
DIQSMIRNMPSKKDANVVQIKDDDILGELLSEISTDKKITNSSKSGSNKNKFCHTVHSNI
TQTASFINQREADKIFEKSVKTDASNFKNIAQSESQIIEDEDEMTLFDASQKKSTSKSVE
LNNSSKVEENSKPEDQNAKKSIESNKQNASQIIEEENSPTVDLSECVADLSTIDFDDGSM
DTDFSSLANNIKSQKNKIDVKIATPKTSVKSMKIGNAVDLSKVAPQLVKIKDEEVFRFYY
LDAYENPYKNPGTVYLFGKTYVSSYDTYCSCCVMVHCIPRRIYLLPRKYIKNSESQLTTM
EDVYKEFDEYANKMRIMEFNCKEVKKHYSFEKEGTPKTSDYLEVRYNARYPAIDSDYSGP
AIEYVFGTTVNALELLLIERKIKGPCWLDIKNISPTAGRFAWCPQIVVTSDMDNISLCSQ
EKAKPPMVIATLNVRMCLNAKLQNEVVMVVVLIHCKYNVDKEPPKPPYERQFCFVTRPRD
TPWPRQIRDTFLKVPNTEVIKCETESDLLEELLTVMQTVDPDLIIGYDCAFQFDVLMQRM
FALKVSNWNRMGRLKSTTPPLLRGKIILNQAFVGRPICDIQVSAKELNLKVRSYDLQSLC
SAVLKIKEHEYKEITPAETLSFFNTADKLLNLMHVTLKEAKYIITIVMDLNVIPLALQIT
CLAGNILSRTLLGGRAERNEYLLLHAFNLKDYITPDKKIEKKKQNDNGPRRKAAAYTGGL
VLDPKKGFYDKLVLLMDFNSLYPSIIQEYNLCFTTVPGAAYTDVEQLTIPESNLEPGVVP
TEIQKLVQSRQQIKQLMKTPNLSPEQKMDYHIRQMALKLTANSMYGCLGAIHCRFYAKGL
AALITAKGREILEDTKHLVEKLQYEVIYGDTDSLMINTNILEYDDVFSIGRKIMREVNNR
YKKVELDIDGVFKYLLLLQKKKYAAVTMSKLPNGQIQLIQEHKGLDIVRRDWCPLACDTG
KKILDILLCDQSSETRLEQVVQILQNVAKNVKEGTAPLSSFVITKQLSKNPDAYPDKKQL
SHVMVALRLNKAGGRMWKAGDTLPYVICEDGTNASATERAYHIDEVKNNEKLKVDVNYYL
LSQIFPVVLRICEPIEGIDDVFLANNLGLQFIYKPKTIACEATLNLPLAINDDRFNNCLP
LTFKCNNERCNTEIIIKDTVTEFHSGRQLSLSMCPNQDCKLPPWKYVNVIQNVVQLAMRR
AISKYYSGWLECENPLCSNRTRRLPLDFPKKFPDCSVCKDVSMNRVYSGTDLYNQLYYYH
KMFDITQPAYKHLLSQCSRDMIAAYNTLKEAIDRQLKRNKFSCVNITGIFSNATANSTGM
FVSHGSREDFDELGDLSDDTDKEI
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggacgattcgcaggcatctacgtctggcaggtccaggcgtcagaagattgataagact
ggtaggctctcggcgttggaaagattgaaggaagctcgaactggtagtaagcgcaagtac
gagattgaagagctagaaaatgtttacgatgaggtagatgagaaagaatatagtaatact
gttttaaaacgtcaacgagatgattggatagttgatgatggagaaagcggttatattgaa
gatggaagggaaatttttgatgatgatctggatgaagaaagtattcaggaagcgagaaaa
cagaagaataacatggctggtcctagaaaaagaaagaaggaggacaacaagaagaaagga
gatattcaaagtatgattaggaatatgccttctaagaaagatgctaatgtagttcagatt
aaagatgatgatattttgggagaattgcttagtgagatttctactgataaaaagataaca
aatagttctaaatcgggtagcaacaaaaataaattttgtcatacggttcattctaacatt
acacaaacagcttcatttataaaccaaagagaagctgataaaatatttgaaaaatcagtg
aaaactgatgcgtcaaattttaaaaatattgcacaaagtgaaagtcaaataattgaagat
gaagatgaaatgactttatttgatgcgtcacagaagaagagcacaagtaaatcagtagaa
ttaaataatagttcaaaagttgaagaaaattcaaagccagaagatcaaaatgcaaagaaa
tcaatagaatcaaataagcaaaatgcaagtcaaattattgaagaagaaaatagtcctaca
gtggatcttagtgaatgtgttgcagatctgtctactatagattttgatgatggaagtatg
gatactgacttttcctcattggcaaataacattaaatctcaaaaaaataaaatagatgta
aaaattgctactcctaaaacttctgtcaaaagtatgaaaattggtaatgccgttgactta
tcaaaagtagcgccgcaactagtcaagataaaagatgaggaagtatttagattctattat
ctagatgcatatgaaaatccttacaagaatcctggtactgtgtatctctttggtaaaact
tatgtatctagttatgatacatactgttcatgttgtgttatggtgcattgtataccaagg
agaatatatctcttgcctagaaaatatataaaaaactctgaatcacaattaactaccatg
gaggatgtatataaagagttcgatgagtacgccaacaagatgcgtataatggagttcaat
tgcaaagaagtgaaaaagcattattcctttgaaaaggagggtacaccgaaaacttcggac
tacttggaagtcagatataatgcacgttatccagcaatcgattctgattattcgggtcca
gcgatagaatacgtatttggtacaacagtgaatgcattagagctgttgcttattgaacgt
aaaattaaaggaccttgctggttagacattaagaatatatcgcccactgcagggcgattt
gcttggtgcccacagattgtggttacttcagacatggacaatatatcgctgtgttcccaa
gagaaagctaaacctccaatggtgatagcgactttaaatgtgagaatgtgtttaaacgca
aagttgcagaacgaagtagttatggttgttgtattaattcattgtaagtacaatgtcgat
aaggaaccaccaaagccaccttatgaacgtcaattttgttttgtcacacgtccacgagat
actccgtggccgcggcaaattcgtgatacctttctgaaagttccgaataccgaagtaata
aaatgtgaaactgaaagcgatttacttgaagaactgttaactgtaatgcagacagtggat
cctgatttaataataggctacgactgtgcatttcaatttgatgttttaatgcagagaatg
tttgcattgaaagtgtctaattggaacagaatgggaagattaaaatcaacgactcctccc
ttacttaggggaaaaataatccttaatcaagcgtttgttggtcgtccaatttgtgatata
caagtttcggcaaaagaattgaacttaaaagttaggagttatgatctgcaatcactttgc
agcgcagtattaaagataaaggaacatgaatataaagagatcacaccagcggaaactcta
tcatttttcaatacagcggataaactgttaaatctaatgcatgtgacattaaaagaagca
aaatacattataaccatagtgatggatcttaatgttataccacttgcacttcaaattact
tgtttagcaggtaatattttatcgaggacgctattaggcggaagagcggaaaggaatgag
tatctgttgctgcatgcttttaacttaaaagattatataacgccagataaaaaaattgaa
aagaagaaacaaaacgataatggtccacgtagaaaggctgcggcgtacactggaggtctt
gtacttgatccgaagaaaggtttttatgacaaactagtacttttgatggacttcaattct
ctatatccgagcattatacaagaatacaatttgtgttttaccactgtgcccggtgcagca
tatactgacgttgagcaattaactattcctgagtcgaatctggagccaggtgtggttccg
acagagattcagaaattagtccaaagtagacagcaaatcaaacagcttatgaaaacgcca
aatctatcaccggaacagaaaatggattatcatatcaggcaaatggcattgaagctcacg
gctaattccatgtatggatgtttgggagcgatacattgtcgattttatgctaaaggcctt
gccgctttaataacagccaaaggtcgggagattctagaagatacgaaacacttagttgaa
aaactgcagtacgaagtaatttatggcgacaccgattctttaatgataaataccaatatt
ttagaatatgacgatgttttctcgatcggcagaaagattatgcgtgaagtcaacaaccga
tacaagaaagtcgagttagatatcgacggggtattcaaatatctattgctattacaaaag
aagaaatacgctgccgttacgatgtcgaaattaccaaatggtcaaatacaattgatacag
gaacacaaaggtttggatatcgtcagaagagattggtgtccattagcctgcgacactgga
aaaaaaattttggatatacttctctgcgatcaatcaagcgaaacgcgtttggaacaagtc
gttcagattttacagaatgttgcaaaaaatgtaaaagaaggaacggcgccactgtcatca
tttgttattactaaacagttgtcgaaaaatccggatgcgtatccagataaaaaacaatta
tctcatgttatggtagcacttagactaaataaagcaggtggtcgaatgtggaaagccggt
gataccctgccatacgttatatgtgaggacggaaccaatgcgagtgctacggaacgggcg
tatcacattgacgaagtaaagaataatgaaaaattaaaggtggatgttaattattatctg
ctaagtcaaatattccctgtggtattacgaatttgtgaaccaatcgagggtatcgacgat
gttttcttagccaacaatttaggtttacaatttatttataaacctaagacgatagcttgc
gaggcaactctgaacttaccgctagctattaatgatgataggttcaacaattgtcttcct
ttgacatttaaatgcaacaatgaacgatgtaatacagaaataattattaaggatactgtt
acagaatttcattctggtcgacagttatcacttagcatgtgccctaatcaggattgtaaa
ttaccaccttggaaatacgtaaatgtgatacagaatgtagttcagcttgccatgagaaga
gcaattagcaaatattacagtggttggttggaatgcgaaaatccactttgttccaacaga
acgagacgactgccgttggatttcccaaagaaatttccagattgttcagtgtgcaaggac
gtttctatgaatcgagtttattctgggacagatctgtacaatcaattgtactattatcat
aaaatgttcgacatcactcaaccggcttacaaacatctgctatctcaatgttcacgggat
atgatagccgcatataacaccctaaaagaggcaattgacaggcaattgaagcgaaataaa
ttttcatgtgtaaatatcacaggaatattcagcaacgccactgctaattctacgggaatg
tttgtgagtcatggttcgcgcgaagatttcgatgaactaggggatctatccgacgataca
gataaagaaatttaa
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integrated database retrieval system
