KEGG   Cyphomyrmex costatus: 108778258
Entry
108778258         CDS       T11118                                 
Name
(RefSeq) probable tyrosyl-DNA phosphodiesterase
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    108778258
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccoa03400]
    108778258
DNA repair and recombination proteins [BR:ccoa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     108778258
SSDB
Motif
Pfam: Tyr-DNA_phospho MGDG_synth
Other DBs
NCBI-GeneID: 108778258
NCBI-ProteinID: XP_018400892
UniProt: A0A195C936
LinkDB
Position
Unknown
AA seq 560 aa
MDVAGAQALSTALTDKEHESLESDKTRKKNQEVSGAGSFDIEKVRQMSIESNNCTNDNQQ
NIGDSQSSSKNSEGSATTFILEHIMRTYQVFGSRKSRKAARRMAIQTMKQIGYTAMVVTP
GKFSIKHAASAPYHLFFTRVENSKENQQFSITFSEILDRSLGEIVNSLHLSFIVNVGWLY
LQYLLAGQRTDMTILYKHRINNENLSKNVTAIRVENKSDFSSHHTNMTILQYKDGIRVVV
STAGLYPDDWENRTQGLWISPHLPYLKNGFTNPGDGESPTDFKRDLVGYLREYGVNEQPE
LTQWIWAVQKADFSKVNVFFIASVPGFHKIPEADFWGYRKLAHILSRYATLPPDASQWPI
VAQSSAVGCFGSTIENWLLKNIIWCMSKEISKGLKNHPKFQFIYPSIENYKQSFDYQYLS
TSLSYNEKMHSKQQWLESYLYQWKAERTGRDRTMPGIKSYTRISPDLKSIPWFVLTSANL
SKAAWGKIQPSGYYIGNYEAGVVFIPKFITGTTTFPIGDEEDSAVPVFPIPYDLPLSQYR
PDDSPFVNEFINTCLELCGN
NT seq 1683 nt   +upstreamnt  +downstreamnt
atggacgttgcaggagctcaggcactttctacagctttgaccgataaagaacatgagagt
ttggaaagtgacaaaacaagaaagaaaaatcaagaagtatcaggagctggcagtttcgat
atagaaaaagtgagacaaatgagcatagaaagtaataattgcacaaatgataatcagcaa
aatatcggtgattctcaaagcagttccaaaaacagtgaaggaagtgcaacaacattcata
ctggaacatatcatgcgtacatatcaagtttttggttccagaaagtcaaggaaggcagct
agaagaatggctattcagacgatgaaacaaattgggtacacagcaatggttgtgacacca
ggaaagttttcgataaaacatgctgcttcagcaccttaccatttatttttcacgagagta
gaaaattccaaagagaatcaacagttctcaataactttctctgagattctcgaccgtagt
cttggagaaattgttaacagccttcatttaagttttatagtaaacgttgggtggttgtat
ttgcagtatttgttggctggccaacgtaccgacatgacaattctgtacaaacatagaata
aacaatgagaatttaagtaaaaacgttactgcaataagggtagaaaacaagagcgatttc
tctagccatcatacgaacatgacgatcctgcaatataaagatgggattagagtggttgtc
tctactgctggcttgtatcctgatgattgggaaaacaggacacaaggattatggatttcg
cctcatctgccctatctaaaaaatggatttacaaatcctggtgatggggaatctccaacg
gattttaaaagagatctcgtgggatatctgagggaatatggagtaaatgagcaaccagag
ttgacgcaatggatatgggcggtgcagaaggcagatttttctaaagtaaacgtgtttttc
atcgcttctgttccgggttttcataaaattcccgaagctgatttttggggatataggaaa
ttggcacacattttatcacgttatgctacactgccaccagatgcttctcagtggcctata
gtcgcacagagttctgctgtaggctgctttggttcaaccatcgaaaactggttgttgaaa
aacataatttggtgtatgtcaaaggaaatttccaaaggtttaaagaaccacccgaagttt
cagtttatttatccgtcaatagagaattataagcaaagttttgactatcaatatttaagt
acctccttgtcatacaatgaaaaaatgcattctaaacaacagtggctagaatcatattta
tatcaatggaaagctgagcgaacaggacgagatcggacgatgcctggtattaaatcctac
acaaggatttcgcctgatttaaaaagcatcccctggtttgtgctcaccagcgcaaatctg
agcaaagctgcatggggaaaaatccaaccatccggttactatataggaaactacgaggct
ggcgtcgtattcataccaaaatttatcactggcacaactacatttcctattggggatgaa
gaagattcagctgttccagtatttccgattccatacgatcttccattaagccaatataga
ccggacgatagtcctttcgtcaacgaatttatcaatacctgtctagaactctgtgggaac
taa

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