Cyphomyrmex costatus: 108779999
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Entry
108779999 CDS
T11118
Name
(RefSeq) tubulin alpha chain-like isoform X1
KO
K07374
tubulin alpha
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa04145
Phagosome
ccoa04517
IgSF CAM signaling
ccoa04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108779999
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108779999
09142 Cell motility
04814 Motor proteins
108779999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108779999
03036 Chromosome and associated proteins [BR:
ccoa03036
]
108779999
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccoa04812
]
108779999
04147 Exosome [BR:
ccoa04147
]
108779999
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108779999
Chromosome and associated proteins [BR:
ccoa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
108779999
Cytoskeleton proteins [BR:
ccoa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
108779999
Exosome [BR:
ccoa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108779999
Exosomal proteins of other body fluids (saliva and urine)
108779999
Exosomal proteins of colorectal cancer cells
108779999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Lipase_3
Motif
Other DBs
NCBI-GeneID:
108779999
NCBI-ProteinID:
XP_018403073
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MRECISMHVGQAGVQMGNSCWELYCLEHGIQPDGTMPSDKTTGSNDCFNTFFNETNSGKM
VPRAVMIDLEPTVVDEVRMGRYRQLYHPEQLITGKEDAANNYARGHYSIGSEIIESVMDR
VRRLTDQCTGLQGFFVFHSFGGGTGSGFTSLLMEKLSDDYSKKSKLEFVIYPAPQVSTAV
VEPYNAILTTHTTISHSDCAFMVDNEAIYDICRRKLGIERPLYANLNRLISQVVSSITAS
LRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVVSAEKAYHEGISVAEITSECFEAANQ
MVKCDPREGKYMACCLLYRGDVVPKDVNAAIAAMKGKSYIRFVDWCPTGFKVGINYQPPT
AVPGGDLAKVQRAVSMLSNTTAIEEAWAKLNRKFDLMYNKRAFIHWYVGEGMEELEFAEA
REDLAALERDYEEVALESPSTPDTSLEY
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagtgtatatcgatgcatgtgggccaagcaggcgtccagatgggcaactcctgc
tgggagttgtattgtttggaacacggcatccagccagatggaaccatgccgtctgacaag
actaccggttcgaatgattgcttcaacacttttttcaacgagacgaactccggcaagatg
gtaccgcgtgctgtgatgattgatctcgagccgactgtcgtcgatgaagttcggatggga
agatacagacaattgtatcacccagagcaattaattactggcaaagaagatgctgccaat
aattatgctcgtggtcattattccatcgggagtgaaattattgaatccgtgatggaccga
gtacgcagactgaccgatcaatgtactggtctgcaaggtttcttcgttttccactcattc
gggggcggcacgggatcaggatttacatctctgcttatggaaaaactatccgatgattac
agcaagaagagtaaattagaatttgttatatatccggcgccgcaagtatctacagctgtg
gtggagccttacaatgcgatattaacaacacacacgacaatcagtcactccgattgcgcg
ttcatggtagacaatgaagcgatttatgacatttgtcgacgtaagctcggtatcgagcga
cccttgtacgcgaatctgaatcgactaatcagccaggtggtgtcatcgatcacagcatcc
ttgagattcgacggcgccctgaacgtcgacttgaccgagttccaaacgaatctggtgccc
tatccccgcatacattttcctttggcgacctacgctccggtggtgtcggctgaaaaagct
tatcatgaaggcatatcggtcgcagagatcacttccgagtgcttcgaagcagcaaatcag
atggtcaagtgcgatccgcgcgaaggtaaatacatggcctgctgcctcctgtaccgtggg
gacgtcgtgccgaaggacgtcaatgccgcgatagctgctatgaagggaaagagttatatc
cgttttgtcgattggtgtcccacaggtttcaaagttggaatcaattatcaaccacctacg
gctgtgccaggcggtgatcttgcgaaggttcaacgagctgtctctatgctatctaacacg
acggctatagaagaagcgtgggctaagctcaatcgcaaattcgatctaatgtacaataag
cgggcatttattcactggtatgtaggagaaggtatggaggaacttgaattcgcggaagcg
cgcgaggatctcgcagcacttgagagggattacgaggaagtcgctctcgaatcgccgtct
acaccggatacatcgctggaatattaa
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