Cyphomyrmex costatus: 108780243
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Entry
108780243 CDS
T11118
Name
(RefSeq) DNA repair protein complementing XP-C cells homolog
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
108780243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccoa03400
]
108780243
DNA repair and recombination proteins [BR:
ccoa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
108780243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
108780243
NCBI-ProteinID:
XP_018403380
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MNDSDDDSSDSSNDFAGITPKDELTASFFAIKPVTKPNLVDSKDNSEDESSNDENFASVP
ENNSIELFSEVVKNLEASQRASVNDEEPKQHFSKYDSTQVTRKVKTEKKKNISDEINAVL
LQGESGIHAFCKNDEDTNDEDTNDDEKQKEDVKRPEDYAIPKEGVQITLPGTSMIFKKKT
ANKRESDLAALLRKKLKANQIIVEKAARLCWLAYGFHLNHQANEPEIMATAVSLISTKSY
PKDNFNLEYLEKFTKWFKNIFTIQSTDDQVIINKETLLNRIAERKIYNYKELVILYVAIL
RGIGLHCRLVVSLNPPLVKTYNELLPKTSTVKKDSKIKDETKPKKTSSKEDKKNVNSKQH
KKNVNSKETKKNVDSKKDLKNNSIIQNDENARRNANEEAKKKAAEILRSKYSYNKKNKDK
LNSNIAIQDNASTSKSIETASTSSRKVEPGPSPRRLRTRKPRDVVPTSTKQQNKIISEDN
QLKTKNFKRQSRNNSSSSEEEELCRKSKKKCSDKSKTVIKSKRKNEKQDQVSTDDEETDN
KLKKRQDIWAEVYVESKASWICINVIDGNVDCIAEIYKKASKPVLYVIAYNSERLVKDVT
RRYCPQWLSVTRKQRIDEKWWIETLSYWQERETTMSKQEDELLLQKELEQPLPKTVGECK
GHPLYVLVRHLLKYEALYPPDCVPLGHLKTGEAIYSRYCVYTLCSRETWLKKARVVKPKQ
DPYKIVKALPKYDKLSGMRLKDSALELFGEWQTTDYVPPEAKDGIVPRNEYGNVDLFKKC
MLPKGTVHIILPGLNRIARKLNIDCATAVVGFNFGCMGAVPATEGYVVCAEYEDTLREAW
ETEQIEAAKRAAEKAKKKVYANWRKLIRGLLIREKLQQKYNFRNESKDQSNKRSKSQNNA
VKKSKAQ
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaatgattccgacgatgacagttccgacagcagcaacgatttcgccggtattacgcca
aaagatgaactgacagcgagtttctttgcaataaaaccggtgacaaagcctaacctagtg
gattcgaaggacaatagcgaggatgagagcagcaacgatgagaatttcgcgagtgtaccc
gagaacaatagcattgaactattctcggaagtggtcaagaacctggaagcttcacagaga
gcttctgtcaatgatgaggaacccaaacaacacttttccaagtacgacagtacacaagtc
actagaaaagtcaaaacagaaaagaaaaaaaatatatcggacgagataaacgctgttttg
ctccaaggggaaagcggaatacatgcattctgcaagaatgacgaagacacaaacgacgaa
gacacgaatgacgacgagaaacaaaaagaggatgttaaacgtcctgaagattatgctata
cctaaggaaggtgtccaaataactttacctggtacaagtatgatttttaaaaagaaaaca
gccaacaaaagggaatcagatctggctgcacttttgcgaaaaaaattaaaagctaatcag
attattgtagaaaaagcagctagactttgttggttggcatatggatttcacttaaatcat
caagccaatgaacctgaaataatggcaacagcagtctctcttatatcaacaaaaagttat
ccaaaagataactttaatttagaatacctagaaaaatttacaaaatggtttaaaaatata
tttacaatacagtctactgatgatcaagttattataaataaggagacattattaaataga
atcgcagagaggaaaatttacaattacaaggaattagtaatattatatgtagcaatacta
agaggtattggtttacattgtcgtttagtagtatctctcaatccaccacttgtaaaaact
tataatgaattactgcctaaaacaagtacagtaaaaaaagatagtaaaattaaagatgaa
acaaaaccaaaaaagacatcctcgaaggaagataagaaaaatgtgaattcaaagcagcat
aagaaaaatgtgaattcgaaggaaactaagaaaaatgtagattcaaagaaagatctcaaa
aataacagtataattcagaatgacgagaatgcacgaagaaatgctaatgaagaagcaaag
aaaaaggcagcagagattcttcgctcaaagtattcttataataagaaaaacaaagataaa
ttaaatagcaatatagccatacaagataatgcttctacatccaaaagtatagaaacagct
tctacaagttcaagaaaagtagagcctggtccatctccaaggcgtttaagaactagaaag
ccacgtgatgttgtacccacttcaactaaacagcaaaataaaattatttcagaagataac
caacttaaaacaaaaaatttcaagagacaatcacgaaataatagttcaagttccgaagaa
gaagaactgtgtagaaaatcaaaaaaaaaatgtagtgataaaagtaaaacagtcattaaa
tctaaaagaaagaatgaaaaacaggaccaagtgtcgacagatgatgaagaaactgataac
aaattaaaaaagagacaagatatatgggccgaagtatatgtggaatctaaagcaagttgg
atatgtataaatgttatagatggaaacgtagattgtatagctgaaatatacaaaaaagca
agcaagccagtattatatgtgatagcttataattcggaaagattagtaaaagatgtcaca
agacgctattgtccacagtggctttctgtcacacgtaaacagcgtattgatgagaaatgg
tggattgagactttaagttattggcaagaaagagagacgaccatgtctaaacaagaagat
gaattactattgcaaaaggaattggagcaaccattacctaaaactgttggcgaatgcaaa
gggcatccgttatacgttcttgtcaggcatttactcaaatatgaagccttgtacccacca
gattgtgtaccattaggacatttgaaaacaggcgaagctatttattcacggtattgcgta
tatacgttatgctcacgagagacgtggctaaagaaagctcgagtagttaaaccgaaacag
gatccttacaaaatagttaaagcacttccaaaatatgacaagctttcaggtatgagactt
aaagactctgcattggaactattcggagaatggcagactacagactacgttcccccagag
gctaaagatggtattgtacctcgtaatgaatatggaaatgtggatttatttaaaaaatgt
atgcttccaaaaggcacagtacatataattcttccaggattaaatcgaatcgcgcggaaa
ttgaacatagattgcgcgactgctgtagtcggtttcaatttcggttgcatgggcgctgta
ccagccactgagggctatgtcgtgtgcgctgaatacgaagacacattacgagaagcttgg
gaaacggaacaaattgaagcagctaaacgagccgctgagaaagctaagaaaaaggtttat
gccaactggagaaaacttattagaggtttacttattagggagaaactacagcaaaaatac
aattttagaaatgaatctaaagaccagtcaaataaacgttcaaaatcacaaaacaatgcc
gtaaagaaatccaaagcacaataa
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