Cyphomyrmex costatus: 108780870
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Entry
108780870 CDS
T11118
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccoa03400
]
108780870
Enzymes [BR:
ccoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108780870
DNA repair and recombination proteins [BR:
ccoa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
108780870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ResIII
Helicase_C
ASCC3_N
AAA_22
AAA_19
Helicase_PWI
Antimicrobial15
Motif
Other DBs
NCBI-GeneID:
108780870
NCBI-ProteinID:
XP_018404188
LinkDB
All DBs
Position
Unknown
AA seq
2120 aa
AA seq
DB search
MPKLPRITRSLRMFTSLEHREETPDCESNNLLKKRQERTKRLKSSFDWHDICKNASKNLV
AHLLALRNIVQRVLANDSSDIINEFTVYALCLLIEDKSMSKKKYNQLGQKSGHITFQCAE
AMMQVVNEIQIECYEETMKLLSELNTNTPDSQIFGANIPYNPARVVWPDTVKLHNMSIKK
TNSNTDKFTMMIHETKPLTQTVSIFDKTMFKKGLRNCYKEHSKDMSYEDFETEIIEKLKT
SQNIQTELFDLLGCKHFEFIEYIIEHQRNILSVFLCPKMIKRSQMSVRGPIMSGQVTVQS
EMERQLYKQVRKEEKKFNRMANKRDAKLETEEREFERKENELQMKRQEALKATCIPLFPK
INALERGTQESFPFVFDSKVNAKRASIISGQKLLLAEDVIRDDNELFERVHIPISTQEPI
NINVNLVSISSLDEIGQIAFSGVTSLNKIQSIVFDAAYNTNENLLICAPTGAGKTNVAML
TVVHQLKQNIRDGQLEKNQFKIIYVAPMKALAAEMTGNFNKKLGPLGVCVRELTGDMKLT
KQEIQQTQMIVTTPEKWDVVTRKGTGDISLTSIVRLLIIDEVHLLHGDRGPVVEALVART
LRQVESSQSMIRIVGLSATLPNYVDVARFLRVNPNKGLFYFDHRFRPVPLSQTFIGVKAT
KPLQQMNDMDLVCYNNVVEMVQQGHQVMVFVHARNATVKTANVLKELALRNNTLKYFLSD
GQARQINKAFAKSRNKYLGELFNSGLSVHHAGLLRSDRNLVEKYFSDGLIKVLVCTATLA
WGVNLPAHAVIIRGTEIYDSKHGSYVDLGILDVLQIFGRAGRPQFDKSGHAAIITSHSKL
SHYLSLLTNQIPIESSFVTYLADNLNAEIALGTISNVTEAVEWLSYTYLFVRMKLNFQAY
GMVYQDLVNDGNLEKKRKELVDTAAKALDKAQMIRYDTRTGDLNATDLGRIASHYYLKYD
TVEIFNELQKFVMTETEILAMISHAQEFEQLKVRDDEVAELDELMEECQLVPQGGVENVH
GKVNILLQTYLSRGQVNMPSLISDQAYVTQNALRIARALFEIMLRRNNAIMAGRLLQMAK
MFEAQQWELLTPLRQFDCLSMEVINKIESRNLEVHRLQEIDVKEISNILRDQRAAILVKK
CCDELPALDVDYSLQPITRTILRIRLKLASQFRWNDKVHGKNSQAFWIWIEDPDYNFIYH
HEYFILTKKMVYQKLQQELVVTIPLSESLPTQYLVKVTSDHWLGCEATFPLTFYNLILPE
THPPHTDLLELQPLPITVLKNPNFESLYNFSHFNPIQTQIFHCLYHTDNNVLLGAPTGSG
KTIAAEIAMFRVFKQNPDQKVVYIAPLKALVRERINDWKVRLEERLGKRVVELTGDVSPD
IKIIASASVIVTTPEKWDGISRSWQTRSYVKKVALIVIDEIHLLGEDRGPVLEVIISRTN
FISSHTHNKVRVVGLSTALANAIDLANWLGIKEMGLYNFRPSVRPVPLEVHISGFPGKQY
CPRMATMNRPTFQAIRQHAPTSPSLVFVSSRRQTRLTALDLIAYLAAEDNPKQWLQMPEE
QMNNILENINDSNLKLTLAFGIGLHHAGLQDRDRRTVEELFVNNKIQVLITTATLAWGVN
FPAHLVVIKGTEYYDGKLKRYVDMPITDVLQMMGRAGRPQFDDSGVAVVLVHDLKKNFYK
KFLYEPFPVESSLMGVLPDHINAEIVAGTIKNKQEFLDYLTWTYYFRRLMKNPKYYDLDI
LEPHCINEYLSKLVETTVKSLMDSHCIDYDEDEQTLLSLPMGKIASFYYLSHNTMLMFTQ
LLEENLTLDQYLRILCNSYEYNELPVRHNEELLNEELAKLCRYSANQYDSPHTKAFLLLQ
AHFSRLPLPCTDYITDLKSVLDQAIRIIQAMIDTVAERGWLTSALRIMQLFQMIVQARWI
DESAITTLPHIRTEDLRLFSSLSMALPILCSITYDNYNRLAKVLLKEYRVNQIQEIHQVI
RDMPIISIDLMLENSRDINVEKRRIMLKPNNGDSIAVQRNEEYTLTIGLKRTNNSKTLKA
HCPMFLKGKDESWFLVLGDIQNRELWALKRVSGINNQQRCYQLQFTTPNSLGTIKLAFYL
ISDCYMGLDQQYSICLDVTC
NT seq
6363 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaattaccacgtatcactagatctttacggatgtttacttctctagaacacaga
gaagaaacaccggactgcgaatcaaacaacttactgaagaaaagacaggaacgaacaaaa
agattaaaaagcagttttgattggcatgatatatgcaaaaatgcatctaaaaatcttgtg
gcacatctgctagcattgagaaacattgtgcaacgagttctagcaaatgattcctcagac
attattaatgaattcacagtttatgcattatgtttattaattgaagacaaaagtatgtcg
aaaaaaaaatataaccaacttggtcaaaaatcaggacatataacatttcagtgtgcagaa
gctatgatgcaggtagtcaatgaaattcagatagaatgttatgaagaaactatgaaatta
ttgtcagaattaaatacgaacactccagattcacagatttttggagcaaatattccttac
aatccagctagggtcgtatggcccgatactgttaaacttcataatatgtctataaagaaa
acaaattcaaataccgataaatttacaatgatgatacatgaaacgaaacctttgacacag
actgtatctatatttgataaaacaatgtttaaaaaaggattaagaaactgttacaaagaa
cacagtaaagatatgtcatatgaagattttgaaacagaaataatagaaaaattaaagacc
tctcagaatatacaaacggaattattcgatctgttaggttgtaaacactttgaatttatc
gaatatattattgaacatcagaggaatatattatcagtatttttgtgcccaaaaatgatc
aagagatcgcaaatgagtgtgcgaggcccgataatgagtggtcaagtgactgtacaatcc
gaaatggaaaggcaattatataaacaagtacgtaaagaggagaagaagttcaacagaatg
gcgaacaagcgagatgctaagttggaaaccgaggaaagagaatttgagaggaaagagaat
gaactgcaaatgaagagacaagaggcattgaaagccacgtgtatcccgttatttcctaaa
ataaatgcattagagagaggcacgcaggaaagtttcccatttgtatttgattctaaagta
aatgccaagcgagcgagcattatatcaggacaaaagttattgttggccgaagatgttata
agggacgataatgaactctttgaacgagtacatataccgatatcgacacaagaacctatt
aatattaatgtaaatctcgtgtcgatatcttctctagacgagattggtcaaatagctttt
agtggcgtaacatcattaaataaaattcaaagtatagtttttgacgcggcatacaacact
aatgagaatctattgatttgtgccccaaccggagcgggaaagacaaacgtggccatgcta
actgtggtgcatcaattgaaacagaacattcgggacggacagttagaaaagaatcaattt
aaaataatctatgtcgcgccaatgaaggccctagcagcggaaatgactggtaactttaac
aaaaaactcggtcctctaggtgtgtgtgttcgcgagctgacgggcgatatgaaactgaca
aaacaagagatccaacaaacccagatgatagtgactacaccggaaaagtgggacgttgtc
acgagaaaaggtacgggcgatatctccctcactagtatcgtgagactgctcatcatcgac
gaggtgcatttgctgcatggtgaccggggacccgttgtggaggcactggttgcgagaacc
ctgcgtcaggtggagtcgtcgcagagtatgattaggatagtcggactgtctgcgacgctt
ccaaattatgtggacgttgctcgatttttgcgcgtcaacccaaacaagggattattctac
tttgatcatcgtttccgaccggtgcctcttagtcagactttcattggcgtgaaggctacc
aagccgctgcaacagatgaacgacatggacttggtatgttacaacaatgtcgtggaaatg
gtgcagcagggccatcaggtcatggtattcgtgcacgcacgaaatgccaccgtgaaaact
gcgaatgtcctgaaggagcttgcgttaagaaacaatacgctcaagtactttctgtccgac
ggacaggcaaggcagataaacaaggcttttgcaaagtcgcgcaacaagtatctcggtgag
ttgttcaacagcggactgtcggtacatcacgctggcttgttgcgctccgacaggaatctc
gttgagaaatacttctccgacggcctgattaaagtgctggtgtgcaccgctacgctagcg
tggggcgtaaatctgcctgcgcatgcagttatcatacgtggaaccgagatctacgattcc
aagcatggttcgtacgtggacttgggcatcctggatgtattgcagatctttggtcgcgct
ggtagaccgcaattcgacaagtcgggacacgcggccattattacgtcgcacagtaagcta
tctcactatctctcgctgctgacgaatcaaataccgatcgagagcagcttcgtcacgtat
ctggccgacaatttaaatgctgagatagcgttaggcacgatatccaacgtgacagaagcg
gttgaatggttaagctacacctatctctttgtacgaatgaaattgaactttcaggcatac
ggcatggtttatcaggatctcgtgaatgacggaaatctcgaaaagaaacggaaagaactc
gtcgacaccgccgcgaaagcgttggataaagcgcagatgatcagatacgatacgcgcacc
ggtgatctcaatgcgactgatttgggacgtattgcgagccattattatctcaaatacgac
acagtcgagattttcaacgagctccagaagtttgtcatgaccgaaacagagattcttgcg
atgatatcgcatgctcaagaattcgagcagctcaaggtacgagacgatgaggtggccgag
ttagatgagctgatggaagaatgtcagcttgtaccacagggcggtgtggagaatgtccat
ggcaaggtcaatatattgttgcaaacgtacctgtccaggggccaagtgaacatgccgtca
ttgatatccgatcaggcttatgtcacgcagaatgccttgcgaatagctagagcgctgttc
gagatcatgctcagacgcaataacgcaataatggccggacgactgctgcagatggcaaaa
atgtttgaggcgcaacagtgggaactgctaacgccgctgcgtcaattcgattgcctctcc
atggaggtgatcaataagatagaatcacggaacttggaggtccatcggttgcaagagata
gatgtaaaggaaattagtaatattttacgggaccaacgcgcggcgatactggtgaaaaag
tgttgtgacgaattgcccgcattggatgtagattatagcttacaacccattacgcgcact
atcctgcggatacgactcaaattagcatcacagtttcgctggaacgataaggttcacgga
aagaattcgcaggctttctggatatggatcgaggacccggattataactttatttatcat
cacgagtattttatactgacgaagaagatggtctatcagaagcttcagcaagaactcgtc
gtgactataccattgtccgaatcattaccgacgcagtatcttgtcaaagttacgagcgat
cattggctcggttgcgaagccacgtttccgttgaccttttacaatctcattttgccagag
actcatcccccgcatacagatttattagaattgcagccgttaccaataaccgttctcaaa
aatccaaactttgagagcttgtataatttttcccatttcaatccaatacagacgcaaatc
tttcattgtctatatcatacggataacaatgttcttctcggtgctccgaccggctcggga
aaaaccattgcagcagaaattgctatgtttcgcgttttcaaacagaatcccgatcagaag
gttgtttacatagcacccctgaaagctctggtcagggaacgcataaacgactggaaagta
cggttggaggaacgactaggtaagagagtggtggagctgactggagacgtgtcacccgac
ataaagataatagccagcgcgagtgtgatcgttacgacgcccgagaagtgggatggtatc
agccggagttggcaaacgcgaagctacgtgaagaaagtggcgcttatagtgatcgacgag
attcatttgttgggcgaggatcgcggtccggttctcgaggtgatcatctctcgtaccaat
ttcatatcctcgcacacgcacaacaaggtcagagtcgtcgggctctcgaccgcgctggcc
aacgcgatagatctggctaattggctcggtatcaaagagatgggtctctacaatttccgg
ccatctgtgagacccgtaccattggaggttcacattagtggatttcccggtaaacaatac
tgtccccggatggcgaccatgaatagaccaactttccaagcgatcaggcaacacgcgccc
accagtccctctctcgtatttgtctcctctcgcagacaaactcgcctgaccgctctggat
cttattgcctatcttgcggcggaggataatccaaagcaatggttacaaatgccggaagaa
caaatgaacaacattctggaaaatataaatgactcaaatctaaagctcacacttgccttt
ggaattggccttcaccatgccggtcttcaagacagagacaggagaaccgtcgaagaatta
tttgtcaataataagatacaggtactaatcactacagccactttggcctggggtgttaat
tttcctgctcatctggtggtgataaagggcacggaatattacgatggcaaattaaagcgt
tacgtggatatgccgataacagacgttctccaaatgatgggtcgtgctggtagaccgcaa
tttgacgattctggtgtggcggttgttcttgtgcatgacttaaagaagaatttctacaag
aaatttttatacgaaccgtttcccgtggaatcgagtctgatgggagtgttacctgatcat
attaatgctgaaattgtcgctggtactatcaagaataaacaagagtttctcgattattta
acgtggacatattattttcgaagattgatgaaaaatccgaaatattacgatctggatatt
ttagagcctcattgtatcaacgaatatctctcgaaattggtagagaccaccgtaaagtcg
ttaatggattcgcattgtatcgattatgatgaggatgagcaaactttactttcgttgcca
atgggtaagatagcgtcattctattatttgtcgcacaatacgatgctaatgtttacgcaa
ttgctagaggagaacttgacgttggatcagtatttacgtatactctgtaactcgtatgaa
tacaatgaattacctgtgcgacataacgaggaattgttgaatgaggaactagcaaaacta
tgccgttattccgcaaatcagtacgattctccacatacaaaagcatttctcttactgcaa
gctcatttctcaagactaccattaccttgcaccgattatatcaccgatctaaaatcagtg
ctcgatcaagcaatcagaataatacaggcaatgatcgatacagtcgcagaacgtggatgg
ttaacgagtgcattaaggataatgcaactgtttcaaatgattgtgcaagcgcgatggata
gatgaatctgcaataacgacgttaccgcatataaggacagaagatttacggttgttttca
tcgttgtcgatggctcttccaatattgtgttccatcacatatgacaattataacagactt
gcaaaggttttacttaaagaatatcgggtaaaccaaatacaggagatacatcaagtaatc
agagacatgccgataatatcgattgatttaatgttggagaattctcgggatatcaacgtt
gaaaagaggaggataatgctgaaacctaataacggtgattccatagctgttcagcggaat
gaggagtatacgttaactattggattgaaaagaacgaataattctaaaactttgaaagca
cattgtccaatgtttttaaaaggaaaggatgaaagttggtttttggtactaggcgacatt
cagaatagagaattatgggctctaaagagggtatctggtataaacaatcagcagagatgt
tatcaattacaattcactacacctaatagcttgggaacaataaagttagcgttctacttg
atttctgactgctatatgggattggatcaacagtacagtatttgtttagatgtaacatgc
taa
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