Cyphomyrmex costatus: 108782497
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Entry
108782497 CDS
T11118
Name
(RefSeq) transient receptor potential protein-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
108782497
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccoa04040
]
108782497
Ion channels [BR:
ccoa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108782497
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
Motif
Other DBs
NCBI-GeneID:
108782497
NCBI-ProteinID:
XP_018406281
LinkDB
All DBs
Position
Unknown
AA seq
1333 aa
AA seq
DB search
MVTDLDKEEKKRNIVIKGVKLPKEVENDKKGCNDWMKNLLKKKIGIKSEELSCSYEEKKL
QERINKWARQQKGKGIEVKVGIGRLRIGGIWKLWTDIEREENKNLRQRKSQDKAEGGSVN
KEDKEKLGSVMWRYINRKRERKLWIENNIGKEARCDYFMELLEGSKEMVKISTRSYTEEE
QTDDTVSEKEIEKALYRLKSGKAVGIDGIPTEAWKYAGEGVWNKLVELIKMVWEEEVMPE
DWKRSIIVLLYKRAFNTKEGQERRLIEENQDHPEILNINCVDPLNRSALIAAIENENIEL
IKLLLELGIEVKDALLHAIKEEYVEAVEVLLEWEEKIHKPGHPYSWEAADSSSNFTSDIT
PLILAAHKNNYEILKLLLDRGATLPTPHDARCGCDECVMSSEQDSLRHSQSRINAYRALT
SSSLIALSSRDPLLTAFELSWELRRLSKMEQEFRAQYNEMREQTQQFATALLDHARTSYE
LEVMLNYNPTGENWDPGERQTLDRLKLAIKYKQKQFVSHPSVQQLLAAIWYDGLPGFRRK
NMIAQLMEVTKLGAMFPVYSVIYMIAPSSQMGSFMKKPFVKFICHSASYAFFLMLLGMAS
QRVEYLLIELFGNEWMREILVDWKKRERGCIPGFVETGVVIYVISLIIGEIKSLWADGLI
EYMSDLWNIVDFIQNTFYVIWISMRITAWWIVQREYWDGLDPWYPRDKWHAFDPMLLSEG
AFAAGMIFSVNPHLGPLQISLGRMIIDIIKFFFIYTLVLFAFGCGMNQLMWYYADLEKKK
CYHASDELPDFDNQEKACSIWRRFANLFETSQSLFWASFGMIDLMSFDLTGIKSFTRFWA
LLMFGSYSVINIIVLLNMLIAMMSNSYQIISERSDTEWKFARSHLWMSYFEDGDTVPPPF
NMIPTNKTFRKLFKCEGSDRSTRSFIKKSREKAMTRHNTVVRLLIRRYVTAEQTKRDEFG
ITEDDVREIRQDISSFRYDLVDILRKNGMCTPTLDKEETNIPGKKGRVMERRLQKDFQIG
IVEGIVQAVIQSEKEPKDVFSQIAKAIGRKGSGAGKKDWNAVVRQSTIAMDPIGSTNEAV
QRQTRRSLRRQLQHQPNSDLASMDPKRLLDYNPNLSDFTPITRIAYAKFMLSKKQPDEQP
NGGDVNDNETEEAPQRSNKIMLTETSTNVVPRPVETFKKGLLKSANNSMDKQTELNVKTE
VRSPSPIPEDSVGEEISKQSISSATFNQEKKVEETENVQKQQQEKSEVTCKRETLDEQKE
EETVNSKNKCQQSKNAEGDDNDNIGQKTSEVEKKIDTEKCVESVVTRTKLEPVQTTKLQG
KSKATGRVIGGWI
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggtaacggatctagacaaagaggagaagaaaaggaatattgtgataaaaggtgttaaa
cttcctaaagaggtagaaaatgataagaaaggctgtaatgattggatgaaaaatctttta
aagaagaaaataggaataaaaagcgaagagttaagctgtagttatgaagagaaaaaattg
caggaaagaataaataagtgggcgagacaacaaaaaggaaaaggaattgaagtaaaagta
ggaataggtaggttaagaattggaggaatatggaagttatggacagatatagagagggaa
gaaaataagaatttgaggcaaagaaagagtcaagacaaagcagagggcggctcagtgaac
aaagaggataaagagaagctgggaagtgttatgtggagatacataaatagaaaaagggaa
agaaagttgtggatagagaacaacattggcaaggaagctcggtgtgattattttatggag
ctgctagaaggttcaaaggaaatggtgaagatttcaacaaggtcatatactgaagaggaa
cagactgacgatacagtttcagagaaagaaatcgaaaaagcgttgtatagattgaagtca
ggaaaggcggttggaatagatggaattccgacagaggcatggaagtatgcaggcgaaggt
gtatggaataagttagtggaattaataaaaatggtatgggaagaagaggtaatgcctgag
gactggaaaaggagcattattgtgctactttacaaaagagcatttaatacaaaggaagga
caagaaagaaggttaattgaggaaaatcaagatcatccggagatattaaatatcaattgc
gttgatccgttaaatcggtcggcactgatagccgctattgaaaacgaaaatattgagctt
atcaagctactacttgaattgggaattgaagtgaaggatgcacttttacatgctattaaa
gaagagtacgtggaagcggtggaagttctattagaatgggaggaaaaaatacacaagccg
ggacatccttacagttgggaagccgcagattcatcatcaaactttacatctgatataact
ccattgattttagcagcacacaaaaataattatgaaatactgaaactattgttagatcgt
ggcgcgactcttcccacaccgcacgatgctaggtgcggttgcgatgaatgtgtcatgtcc
agcgaacaagattccctccgacactcgcagtctcgaataaacgcgtaccgagcactcact
tcgtcatctctaatcgcgctttcatcaagagacccgcttttgacagctttcgagctttca
tgggaactgcgtcgtctcagcaaaatggagcaagaattccgcgctcaatacaacgagatg
cgggaacaaacgcagcaatttgcaaccgccttactagaccacgcgcgcacatcttacgaa
ttagaagtaatgttaaattataatcctactggcgaaaattgggaccctggggaaagacag
actttggatcgtctcaaactggctattaaatataagcagaaacaattcgtctctcatccg
agtgtgcaacaattattggctgctatttggtatgacggtcttccgggattcagaagaaaa
aatatgatagcacagttgatggaagttaccaaacttggagcaatgtttccagtttacagt
gttatttatatgatagccccctcttcgcaaatgggatcgtttatgaaaaagccatttgtc
aagtttatatgtcattctgcatcatatgctttttttttaatgctactcggtatggcatcg
caaagagttgaatacttattaatcgaattgttcggtaacgaatggatgcgagaaatactt
gttgactggaaaaagcgggaacgtggctgcatcccgggttttgtcgaaacaggcgtggtc
atctatgtgataagtttaatcatcggcgagattaagagtttatgggcggatgggttaatt
gaatatatgtcagatttgtggaatattgtggatttcattcaaaatacgttttacgtaatc
tggataagtatgcgtattacggcttggtggatagttcagagagaatattgggatggttta
gatccttggtatccaagagataaatggcacgcattcgatccaatgctgctttccgaagga
gcgtttgcagcgggaatgatatttagcgtgaatcctcatcttggaccgcttcagatttcc
cttgggaggatgataatagatattatcaagttttttttcatctacaccctcgtgttattt
gcttttggctgcggcatgaatcagttgatgtggtattatgcggacttagaaaaaaagaaa
tgctatcacgcatccgatgagctgccggatttcgataatcaggagaaagcgtgctctata
tggagaagatttgccaacttgttcgagacatcacaatctctcttttgggcaagttttggt
atgattgatttaatgtcgttcgacctgacaggcattaagagcttcacaagattctgggcg
ctcctcatgtttggttcttattccgtgataaacattattgtgctattgaatatgttgatc
gctatgatgtctaattcttatcaaattatttcggaaagatctgatacagaatggaaattt
gccaggagccatttatggatgagttatttcgaggatggcgatactgtaccaccaccattt
aatatgattccaacaaataaaactttccgaaagttattcaaatgtgaaggcagcgatcgt
tccacaagatcttttataaaaaaatctcgagagaaagctatgactcgacataacactgta
gtacgtctacttatacgtcgttacgtaacggcagaacaaacgaaacgggatgagttcggt
atcacggaggatgatgtcagagaaattcgccaggatatttcaagttttcgatatgatcta
gtcgatatccttaggaaaaacggaatgtgcacaccaacactcgacaaagaagaaacaaat
atacccggaaaaaaaggcagagtgatggaacgtcgactccagaaagatttccagattggt
attgtggagggcattgtgcaagctgttattcaaagcgaaaaagagccaaaggacgtgttc
agtcaaattgcaaaggcgattggacggaaagggagcggagccggtaaaaaggactggaac
gccgtagtaaggcaaagcaccattgccatggatcctatcggaagtacaaatgaagcggtg
caacgtcaaacccggcgtagtttacgtcgccagctgcaacaccagccgaattctgaccta
gcgtccatggatccaaaacggctactcgactataatccgaatctctcggacttcactccg
attactagaatagcctacgccaagttcatgctaagtaagaagcaaccggatgagcagccc
aatgggggggatgtaaatgataatgaaactgaggaggctcctcaaagaagcaacaaaatt
atgttaacggaaacttctacaaatgtagttccacgacctgttgaaacgtttaaaaaaggt
ctactaaagtctgcaaacaacagtatggataaacaaacagaactcaatgttaaaactgaa
gttagatcaccatcacccatacccgaagattccgtaggagaagaaataagtaagcagtca
atatcatctgctacgttcaatcaagagaaaaaagtcgaagaaacggaaaatgttcaaaag
caacagcaagaaaaaagtgaagtaacatgcaaacgagaaacattagacgagcaaaaggaa
gaagagacggtaaatagtaaaaataagtgtcagcagtcgaaaaatgcagagggagatgat
aatgataacattggacagaagacctcagaagtagaaaagaaaattgatacagaaaaatgt
gttgaatctgtcgtaacaagaacgaaacttgaaccagttcaaactacaaaattgcaagga
aagtcaaaagcaaccggtcgagtaataggaggttggatttaa
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