Cyphomyrmex costatus: 108783182
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Entry
108783182 CDS
T11118
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1 isoform X1
KO
K03265
peptide chain release factor subunit 1
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108783182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108783182
03012 Translation factors [BR:
ccoa03012
]
108783182
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108783182
Translation factors [BR:
ccoa03012
]
Eukaryotic type
Release factors
108783182
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
108783182
NCBI-ProteinID:
XP_018407186
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MSNEETSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTAS
NIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAEVATQLYITNDKPNIAGLILAGSADFKTELSQSD
MFDPRLQAKVIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQETGK
YCFGVEDTLRALELGSVETLICWENLDIQRYVLKNHTNAEEKVLHLTPEQEKDKTHFTDK
ESGVELELVECQPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIGGILRYKVDFQ
SMQLDDIETDGFDLDDY
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgaggagacctccgccgaccgcaacgtcgagatctggaagatcaagaagctc
ataaagagcctcgagatggccagagggaatggcacgagtatgatttcgttaatcatacct
ccaaaggaccaaatatcgagagtgagtaagatgctggcggatgaatttggtacagcgtcg
aacattaagtcacgtgtaaatagattatctgttttgggtgcaatcacatcggtgcagcat
aggctaaagctatatacaaaagtgcctccaaatggcctggtaatttattgtggaactatt
gtaacagaggaaggaaaagaaaagaaggtcaacatcgattttgagcctttcaaacctatt
aatacatctttatatctttgtgataataagtttcacacagaagcgctcacggcattactt
gcggatgataacaaatttggttttattgtaatggatggtaatggagcgttatttggaacg
ctgcaaggtaatacgcgcgaggtgttacataaattcaccgtggatcttcccaaaaaacat
ggtagaggtggtcaatctgcattgcgttttgcccgattacgtatggaaaaacgacataat
tacgttcgaaaagtagccgaagtcgctactcaattatatataacaaatgataaacctaac
atcgctggattgattcttgcgggtagcgctgatttcaagacggaacttagtcaatccgat
atgttcgatccaagattgcaagctaaagttataaaactggtcgatgtatcgtatggtggc
gaaaatggttttaatcaagctattgaattagcggccgaatctttacaaaatgtgaaattt
attcaagagaaaaaattgattggtcgttactttgatgaaatttctcaagaaactggcaaa
tattgctttggtgtagaagatacgttgagagccttggaattgggtagcgttgaaacttta
atttgttgggaaaatttagatattcaacgatatgtcctgaaaaatcatacgaacgcggaa
gaaaaagtactacatttaacaccggaacaagaaaaagataaaactcattttaccgataag
gaaagcggggtagaattggaactcgtagaatgtcaaccactactggaatggctcgcgaac
aattataaaagttttggtgccactctggaaattatcacggacaagtctcaggaaggatcc
cagtttgttagaggttttggtggcatagggggtattttgcggtacaaagtggactttcaa
agtatgcagctggacgacatcgagactgatggctttgatttggatgactactaa
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