KEGG   Cyphomyrmex costatus: 108783435
Entry
108783435         CDS       T11118                                 
Name
(RefSeq) collagen alpha-1(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa04512  ECM-receptor interaction
ccoa04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108783435
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108783435
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ccoa00535]
    108783435
Proteoglycans [BR:ccoa00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   108783435
SSDB
Motif
Pfam: Collagen Laminin_G_2
Other DBs
NCBI-GeneID: 108783435
NCBI-ProteinID: XP_018407501
LinkDB
Position
Unknown
AA seq 867 aa
MYLQTWIFAIAHITYAQYVVAKRGLCNGYKSGVDDLQTLEFISKLKLDLLDARYSGMTKV
RGSNRMQTAYRLEKGTDVTLPTKDIIPSGLPEEFSLVYTLKARKSPKPPWHVIKIADVKG
DSQFLITMNSRKRTLDFSSIDNEGELQTVSFVNDRVFDRDWHKVNFGVFKDKLVLNVDCE
FVGVEELKPRSSIKVDGDLSIAKMSNNKVTVPIDLQWMVLTCDPTRDERETCKELPKIIE
AAPLQIKPTCETICPQGPPGFNGTNGFPGPPGPPGIPGPIGTSGLPGYPGQPGPPGEQGK
AGTPGNIGARGFPGLQGSKGLIGPAGLPGSPGRKGERGDMGFPGLKGDQGPRGFPGSPGN
AGNFLHPFGSSEYSYKGEKGVKGERGDNGIQGQSGEKGEPGDKGYSGLDGSRGRDGPSGL
PGLPGPPGLPGPPGPKGNTVYMNTSSIPGSQGPRGIIGSPGPSGPPGLPGSPGPPGPKGD
IGNRGRDGTPGLTDNSVISGLPGPEGPIGSPGDDGLPGEKGEIGPMGPPGPSGNPGKDGY
PGLPGPQGLPGSRGEPGSPGPRGLNGLPGKLGPPGFDGKSGQKGNKGQEGERGSVGPRGL
PGNSGSIGSPGTPGVPGLEGRPGPPGPPGSIGPPGPPGSPGLPAVNSSFDNIGSPGLEGP
RGPLGLPGIPGEKGASGERGLEEKMTEMAVLMQGPPGPPGRGRPGRLGSPGSQGSPERLK
ELTEGLRGLPGLPGPARHGRPGRAGKRGIPGDPGPPGLPGDRGFAGLPGSQGPIGPQGLP
GERGEKGDRGPEGIGLEGPPGLIGPPGPPGNDGVGLPGRQGDRGEPGRPGVPGTRGSPGA
QGPTGYCEFCNYPSSNYLHNRGNEKGP
NT seq 2604 nt   +upstreamnt  +downstreamnt
atgtatctgcaaacatggatatttgcaatagcgcacataacttatgctcaatacgtcgtc
gccaaacgcgggctatgcaatggctacaagtccggcgtagacgatcttcaaacactcgag
tttatcagcaagctgaaattggatctgttggacgcgcgttacagtggcatgacgaaggtc
cgaggcagtaatcgcatgcagacggcataccggctggagaaaggcactgatgtcaccctc
ccgacgaaagatatcatacccagcggacttccagaagagttctcattggtatacacgctg
aaagctaggaaatcaccgaagcctccttggcacgtcattaagattgcggacgtgaagggt
gactctcagtttctcatcacaatgaattccaggaagcgaacactggatttttcatcgatc
gataacgagggagaattacagacggtctcttttgtgaatgatcgcgtgttcgatagggat
tggcacaaggtaaacttcggggtgttcaaggataaactagttcttaacgtcgattgcgaa
tttgttggcgtagaagaattaaaaccacgcagttcgatcaaagtcgacggggatctgtcg
atagctaaaatgagcaataataaggttactgtaccgattgacttgcaatggatggtttta
acctgcgatccaacgagagacgagagagaaacgtgtaaagaactaccgaaaatcatagaa
gccgctccgcttcaaataaaacctacctgcgagacgatctgtccacaaggaccacctgga
tttaatggtacaaatggatttcctggtccgcctggaccacccggaataccgggaccaatt
ggtacgtcaggtttacctggatatccagggcaaccggggccaccgggtgaacaaggaaag
gcaggaactccaggtaacattggcgctagaggttttccaggactgcaaggttctaaagga
ttgatcggacccgcaggactaccgggatcaccaggccgaaagggtgaaagaggcgatatg
ggatttcctggtctaaaaggagatcagggtcctcgagggtttccaggttcaccaggaaat
gcaggtaattttttgcacccttttggatcatcagaatactcatacaagggcgagaaagga
gtcaaaggtgaacgaggagacaatggcattcaaggacagtctggtgaaaaaggcgaacct
ggagacaaggggtattcaggattagatggatcccgtggtcgtgacggcccatcaggtctt
cctggtcttccgggacctcctggtcttccaggaccccctggaccgaaaggcaacactgta
tatatgaacacatctagtattccaggatcacaaggtcctcgtggtataatagggtcgcca
ggaccatcaggtccaccaggactgccaggatctcctggtccgccaggtccaaaaggcgat
atcggaaaccgtggtcgagatggtacacctggattgacggataatagcgtcatatcggga
ctacctggtcccgaaggacctatcgggtctccaggcgatgatggtctcccaggtgaaaaa
ggagaaattggaccaatgggtcctccaggaccatctggaaatccaggaaaggatggatat
cctggattaccgggaccgcagggacttccagggtcacgcggagaaccggggtctccagga
cctcgaggtttaaatggacttccaggaaaattaggaccaccaggattcgatggaaaatcg
ggtcaaaagggtaacaaagggcaggaaggtgaacgaggttctgtcggacctcgtgggtta
ccaggaaattcaggctcaataggttcaccaggcacaccaggcgtaccaggactagaagga
agacccggtccacccggtcctccgggatcaataggaccaccaggacccccaggctcgccc
ggtcttccagctgtgaacagtagctttgataatattggtagtcccggcctcgaaggacct
agaggtccactaggtcttccaggaataccaggtgaaaaaggagcttccggagaacgagga
ttagaagaaaagatgaccgaaatggcagtgttaatgcaaggcccacctggtccacccggt
cgaggccgtccgggtcgtcttggatcacctggatcccaaggtagcccagagagactgaaa
gaactaacagagggtctacgagggctacccggattaccgggaccggctcgacacggccgg
cccggtcgagccggaaagcgaggcattccaggcgatccaggcccaccaggtttgccagga
gatcgtggattcgccggtttacctggctcgcagggtcccattggtccacaagggctacct
ggcgaacgtggggaaaagggggatagaggtcccgagggaatcggcttagaaggaccgcct
ggtttaataggtccaccagggcctcctggtaatgatggcgtcggtttacccggaaggcag
ggagacagaggtgaaccaggcagaccaggtgtccctggtacaagaggatcaccaggagcg
caaggaccaactggatattgcgaattctgtaattatcctagcagcaattacttacataat
cgtggcaacgagaaaggtccttaa

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