Conger conger (European conger): 133118568
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Entry
133118568 CDS
T10633
Symbol
col9a1b
Name
(RefSeq) collagen, type IX, alpha 1b
KO
K08131
collagen type IX alpha
Organism
ccog Conger conger (European conger)
Pathway
ccog04510
Focal adhesion
ccog04512
ECM-receptor interaction
ccog04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133118568 (col9a1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133118568 (col9a1b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133118568 (col9a1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ccog00535
]
133118568 (col9a1b)
Proteoglycans [BR:
ccog00535
]
Extracellular matrix (ECM) proteoglycans
Others
133118568 (col9a1b)
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
133118568
NCBI-ProteinID:
XP_061084653
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Position
18:complement(2571198..2602488)
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AA seq
882 aa
AA seq
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MVGKGFHIISQFHLAAESLRGSVKTVVGSAPMHVAYKLGPESNFKIQTRSAYPLGLPEEF
AFLTVFRMDRSTKTKNWNLWQIQDVNANEQLAVGLNGESQSLEFSYTTPDKIRQTAVFSF
LPFLFDSQWHKIVLVVKKGTVSLFVDCIMMDSQNLSPRGKVNLDGFTVIGKLKDNPAIAV
PFDLQLMLIHSIWETMASAIIFRRSLLVVLLQIFVICSAQRNQAGPRGPPGPPGPAGVPG
IDGIDGDRGEEGVDGPLGPDGDAGKPGSSGLPGLPGADGLTGPAGEEGPDGPLGQKGEPG
KAGPRGEAGVGSDGPPGPPGPGGLPGEQGKVGPPGAMGVRGPQGPRGPTGPRGAAGMRDI
SAELCPNACPIGAPGHPGLPGMKGHKGVKGDAGEPGKQGHKGEEGDQGGPGDVGAQGSTG
PQGTRGITGMMGAKGESGPRGHDGDPGTQGVMGATGDHGQRGVMGESGPKGDQGPQGSRG
ITGLPGPKGSGGLPGVEAREGIPGMPGAKGSTGKAGLPGEGGLQGLPGLPGMPGPKGVSG
EKGSSGDRGLPGTIGSSGRTGERGEQGEVGPIGPIGMNGDVGEQGPPGPQGKPGPRGSKG
DLGLPGLPGPSGLPGVKGERGDVGLTGPIGEQGDQGAEGTPGDKGEMGDQGEPGPKGATG
NPGEAGNRGPEGSRGQPGIEGPPGSPGPRGMQGNRGLPGARGTQGPAGKEPSDQHIRQVC
MRVMQEQLAQLAASLRRPESGAAGLPGRPGPPGPPGQPGDSGFPGQAGARGLPGLKGPPG
LLGLKGPKGEAGDRGDRGITVRGAKGQPGAPGLPGEPGKPGYGRDGRDGERGRPGVPGQL
GVPGPPGPPGPNGYCDPSSCNLQAVAAPQSLKDSSMKGPSGN
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcaaagggttccatatcatttcgcagtttcacctcgccgcggagtcattaaga
gggtctgtcaaaacggtggttggctcggcgcctatgcacgtggcatataaattaggaccg
gaatccaacttcaagatacagaccagatccgcataccctcttggactaccggaagagttt
gctttcctgactgtatttcggatggacagaagtaccaaaaccaagaactggaacctgtgg
caaatccaagacgtcaatgccaacgaacaactggccgtggggctgaatggggaaagccaa
tctctggaattctcatataccacgcccgataaaataagacagactgcggtgttctctttc
ctaccgtttctgtttgattcgcaatggcacaagatagtactggtcgtcaagaagggaacg
gtttctcttttcgtcgactgcataatgatggactctcaaaacttgtccccacgaggcaaa
gtgaatctggacggctttactgtgataggaaaattaaaggataaccccgctattgcagtg
ccgtttgatctgcaattgatgctgattcactccatctgggagaccatggctagcgccata
atttttcgccggtcgctgttggttgttttgctgcagattttcgtgatttgctccgctcaa
cgaaaccaggccggtccccgtgggccccccggcccaccaggtcctgcaggcgtccccgga
atcgatggcatagatggtgacaggggtgaagaaggcgtagacggccctctcggtccagat
ggggatgctggaaaaccaggatcttcaggattgccaggactgccaggtgctgatggtttg
accggcccggcgggagaggagggaccagacggccctctgggacagaagggagaacctggg
aaagctggaccacgtggagaagcgggtgttggatctgatggacccccagggccacctggt
ccgggagggcttcctggggaacagggcaaagttgggccccctggagccatgggtgtgagg
gggccacaaggaccacggggtcctaccggccctcggggagcagcagggatgcgggacatc
agcgctgaactgtgccccaatgcctgccccatcggtgcgcccggtcaccctgggttgcca
ggtatgaagggtcataaaggtgtgaaaggggatgctggtgagccagggaagcaaggtcac
aagggtgaagagggggaccagggcggcccaggggatgtgggagcacaggggtctacaggt
ccccagggcacaagaggaatcacagggatgatgggggccaagggtgaatcgggaccccgg
ggccacgatggagatccagggacgcagggggtcatgggagctactggggaccacggtcag
aggggtgttatgggagaatccgggccgaaaggtgatcaaggtcctcaagggtcacgtggg
atcactggacttcctgggcccaaaggaagtggtggactgccaggagtggaggcccgtgag
ggaatccctggaatgccaggagccaaggggagcacggggaaagcaggacttcctggggag
ggcggtctgcagggacttcctggtttgcctggcatgccaggaccgaaaggagtcagtggt
gaaaagggcagctctggagatcggggcctccctggaacaatagggtcctctggaagaaca
ggagaacgaggagagcaaggggaagtgggtccaattggaccaatcggaatgaatggagat
gtaggagagcagggccctcctgggcctcaaggaaagcctgggccacggggttcgaagggg
gatctgggcctgcccgggcttcctggaccttctggccttcctggggtgaaaggagaacga
ggtgatgttggtttaactggccctataggcgaacaaggagaccaaggtgctgagggaacc
ccaggagacaaaggagaaatgggtgaccagggagagccaggaccgaagggcgcgacggga
aacccgggcgaggcggggaacaggggcccggaggggagcaggggccagcctggcatcgag
gggcccccaggctctcccggccccaggggcatgcaggggaacaggggcctgccgggggcc
cggggcacccaggggccagcgggcaaggaacccagcgaccagcacatccgacaagtgtgc
atgagggtgatgcaggaacagctggcccagctagcagccagcctgagacggccagagtcg
ggcgccgctgggttgcctggccgaccaggcccccctggtcctcctgggcagccaggagac
agcggcttccccgggcaggctggagcgagaggcttgcctggtctcaaagggcctccgggg
ctgctgggactgaagggacctaaaggtgaggcaggagacagaggggacagaggcatcaca
gtacgaggagccaagggccagcctggagctcctggtctgccaggtgagccaggtaaaccg
ggctacggcagggacgggcgggacggggagcggggcaggccgggggtaccggggcagctg
ggcgtgcccgggcccccgggccccccggggccaaacgggtactgcgacccgtcctcctgc
aacctgcaggccgtggccgcgccccagtccctcaaggactccagcatgaagggcccgtcg
ggaaactga
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