Conger conger (European conger): 133121999
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Entry
133121999 CDS
T10633
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
ccog Conger conger (European conger)
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccog03037
]
133121999 (ift140)
Cilium and associated proteins [BR:
ccog03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
133121999 (ift140)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
TPR_GEMI5
Beta-prop_HPS5
Clathrin
TPR_IFT80_172
TPR_COPA_B
Beta-prop_WDR75_1st
WDR55
tRNA_int_end_N2
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Consortin_N
DUF2524
Motif
Other DBs
NCBI-GeneID:
133121999
NCBI-ProteinID:
XP_061087609
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All DBs
Position
2:complement(53356446..53396249)
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AA seq
1462 aa
AA seq
DB search
MAVYFDHRIEAPEPNGPPCQIAWHSTHPVLAVASASPTAGGCVDLYLQQGEHVASCHVER
SFQPTVLRWHPSRSMLAVGWETGEVLLLTHPSGEQSALPATHSEPVTLLDWSSTGSRLVT
GDQMGVLALWKLDPRGRVQGSCIVKHEYGKALTYSVFRPLPPGEDMIQLARAAVSGDESA
LDMFNWRKTGKGASLKLGSLEALTFFVSTADGYVHCVDEKGKSSPLLTVDGSVQKLLFLE
KRDVLAVITETLMLSQYRLGPEGGAQELIKVKLSGKSGQMANIAWADHGLLITATGEQVI
RLWDLERDENYALSLDEGLGFEKAETLNCVSYCAAKDIIAAGTGRGRIAMWQRVSSVSHG
EEVHGQWKLQTPTEFEGNITQLQWGSSLNLLAANGVSTVLILCEHVMSAHFSQQVAAVQL
APSQLSLYSFSSGSQLSLRSDTHVKGVCVAKDTVAVWNGKQVTVYEMSGTTLHSTGSFPC
ESQALAMYEENIYTVEPNRVQVRTLQGTVKQLLVFSEVEGNPVLLNVCGTFLAVGTDTAH
FKLFDLSRREAKPHCSAKNLSEITSNVGALLSVKCNANGSHVSVLLAQVSGRPDHKVYFY
DVEMDTVSHFDFFTGRPPSGVSQTEDPESGQSQNAELRGRCPVSQFWDESEPRLFACETV
RTADPRCSSLPDGLGEMEVLVVSFFCTQEHGLLLQDSYLKPAGVQALLALDVPFYYFSCK
PGEGEAEAEEPPGSAPTPAPVPQSSAPPMVSRRAFRDFVGLEECDKPTRDAMLNFSFYLT
IGDMDEAFKSIKLIKSEAVWENMARMCVKNRRLDVARVCLGNMGHARGARALREAEAEPE
LEARVAVLATQLGMLEDAERLYKSCQRYDLLNKLYQAAGQWQRAVETAETHDRVHLRTTY
YSYAKHLEAMGDRNMALVYYEKSDTYRFEVPRMLLEDVLSLEIYVNKMKDKSLFKWWAQY
LESQSDMESALRYYEYAQDFLSLVRVHCYLGNIQKAAEIANETGNRAASYHLARQYESQE
EIKQSVHFYTRAQAYNNAIRLCKENGLDDQLMNLALLSNPEDMMEAACYYEEKGNHMDRA
VMLYHKAGHFSKALELAFSTQQFGALQLIAEDLDEKSDPALLARCSDFFIKHSQYQKAVE
MLVAAKKYHEALQLCLDQSLTITEELAESMTVSRDSKDLPEEARKELLEKIADCCMRQGN
YHLATKKYTQAGNKLKAMRALLKSGDTEKIVFFAGVSRQKEIYIMAANYLQSLDWRKDPE
IMKNIIGFYTKGRALDLLAGFYEACAQVEIDDYQNYEKALGAMTEAYKCLAKAKMRSTEE
QEGRLADLQHRITLVKRFVQARRVYEEDPGEAVRLCDTLLEEADLDPAVRIGDAYGFLVE
HHCQQGSYQVAHRKLEEMLKRLPSVNVSYYVSQRSLEALQLAVGVPLGGVRGAPLGRSTR
RDSGGEEDEVEEEEVLEAHQGD
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgtactttgatcatagaatcgaggctccggagccgaacggtcctccgtgtcaa
attgcatggcactccacacatcctgtgttagcagtggcctcagccagtcccacagctggt
ggctgcgttgatctttacctccaacagggagagcatgtggccagctgtcacgtggagcgc
tccttccagccgacggtgctgcgctggcaccccagccggtcgatgctggccgtcggctgg
gagacgggggaggtgctgctgctgactcaccccagcggagagcagagcgctctcccggcc
actcacagtgagcccgtcaccctgctggactggagcagcaccgggagccgcctcgtcaca
ggagaccagatgggtgttctggcgctgtggaaactggatccccgcgggagggtacagggc
tcctgcatcgtcaaacacgagtacggcaaagccttaacctactctgtgtttcgacccttg
cccccgggagaggacatgatccagctggcgcgggcggcggtgagcggagacgagagcgct
ctggacatgttcaactggaggaagacggggaagggggcctcgctgaagctgggctccctg
gaagcactgactttctttgtcagcactgctgatggatatgtacactgtgtggatgagaag
ggcaagagcagccctctcctgactgtggacggctccgtgcagaagctgctgttcctggag
aaacgtgatgtgctggctgtgatcacagaaaccctgatgctgtcgcagtaccgcctgggg
cctgaggggggagcccaggagctcataaaggtgaagctgagtgggaagagcgggcagatg
gcgaacatcgcctgggcagatcacggcctgctcatcactgccacaggggaacaggtcatc
agactatgggacctcgagagggatgaaaactacgcgctgtccctggatgagggcctgggc
tttgaaaaggcagagacgctcaactgcgtgtcatactgtgcagctaaagacatcattgca
gcaggaacagggaggggtcgcattgccatgtggcagagggtgtcttcagtgagccatgga
gaagaggtccatggccagtggaagctacaaacaccgactgagtttgaagggaacatcacc
cagctgcagtggggctccagcctgaacctgctggcggccaacggggtgagcaccgtgctg
atcctctgcgagcacgttatgtccgcccacttcagccagcaggtggcggcggtgcagctt
gctcccagccagctcagtctgtacagcttcagctccgggagccagctcagcctgcgctcc
gacacgcacgtcaagggcgtctgcgtcgccaaggacacagtggccgtgtggaacgggaaa
caggtgaccgtttacgaaatgtcggggacgaccctgcacagcacgggctctttcccctgt
gaatcccaagccctcgccatgtacgaggagaatatctacactgtagagcccaacagggtg
caggtccgcaccctgcagggcacagttaaacagctcctggtgttctctgaagtggagggg
aacccggttctgttgaatgtatgcggcaccttcctggcagtgggcaccgacaccgcacac
ttcaaactctttgacttatcccgcagagaggccaagccgcactgcagtgctaaaaacctg
agtgagataacctcaaatgtgggagctctactgtcagtcaagtgtaatgccaacggcagt
cacgtcagcgttctccttgctcaggtcagtggaaggcctgaccacaaggtctacttctat
gatgtggagatggacacagtatcgcactttgacttcttcaccggtcgaccgcccagtgga
gtatcgcaaacagaagacccggagagtggccagtcccagaatgccgagctgcgtggccgc
tgccccgtctcccagttctgggacgagagcgagccgcggctgttcgcctgcgagacggtg
cggacggcggacccgcggtgctcgtccctgcctgacggcctgggagagatggaagtgctg
gtggtgtccttcttctgcacccaggagcacgggctgctgctgcaggactcctacctgaaa
ccagctggggtgcaggccctgctggcgctcgacgtgcctttttattacttctcctgtaag
cctggagaaggagaagcggaggcggaggagccccctgggtcagccccgaccccggcccca
gtcccacagtcctctgctcctcccatggtgtctcgccgggcgttccgagacttcgtgggc
ctggaggagtgtgacaagcccactcgtgacgccatgctcaacttcagcttctacctgacc
atcggcgacatggacgaggccttcaagtccatcaagctcataaagagcgaggcggtgtgg
gagaacatggcacggatgtgcgtgaagaaccggaggctggacgtggcgcgggtctgcctg
gggaacatgggccacgcccggggggcccgggccttgcgggaggctgaggcagagcctgag
ctggaggccagggtggcagtgctggccacacagctgggcatgctggaggatgcagagaga
ctgtacaagagctgccagcgctacgacctcctcaacaagttgtaccaggctgccggccag
tggcagcgcgccgtggagaccgcagagacccatgaccgggtccacctacgcaccacctac
tacagctacgccaagcacctggaggccatgggcgaccgcaacatggcccttgtgtactac
gagaagtccgacacctacaggtttgaggttcccaggatgctcttggaggacgtgctgtct
ctggaaatctacgtcaacaaaatgaaggacaagagcctgtttaagtggtgggctcagtac
ctggagagccagtcagacatggagtcggcgctgcgctactacgagtacgcacaggacttc
ctgtccctggtgcgggtgcactgctacctgggaaacatacagaaggcggcggagatcgcc
aacgagacggggaaccgagccgcctcataccacctggcacggcagtacgagagccaggag
gagatcaagcagtcggtgcacttctacacacgagcccaggcctacaacaacgccattcgc
ctctgcaaggagaacggcctggatgaccagctgatgaacctggccctgctcagcaaccca
gaggacatgatggaggccgcttgctactatgaggaaaagggcaatcacatggaccgggct
gtcatgctttaccacaaggcgggccacttctccaaggccctggagctggccttctccaca
cagcagttcggagcactgcagctgatcgccgaggacctggatgagaaatccgacccagcc
ctgctcgctcgctgctccgacttcttcatcaagcactcccagtaccagaaggcagtggaa
atgctggtggcagccaagaagtaccatgaggccctccagctctgcctggaccagagcctg
accatcaccgaggagctggcggagagcatgacggtgtcgcgggactccaaggacctgcct
gaggaggcccgcaaagagctgctggagaagatcgccgactgctgcatgcgacagggaaac
taccacctagccaccaagaagtacacacaggctggcaacaagctcaaggctatgcgggcg
ctgctgaagtctggagacacggagaagattgtgttttttgcaggggtttcccgccagaaa
gagatctacatcatggctgctaactacctgcagtcccttgactggcgcaaggaccctgag
atcatgaagaacatcatcggtttctataccaaagggagagcccttgacctccttgccggc
ttctatgaggcttgcgcccaggtggagattgatgactaccagaactatgagaaggcactg
ggggcgatgacagaggcctacaagtgcctggccaaagccaaaatgcgcagtacagaggag
caggagggcaggctggctgacctgcagcacaggatcactctggtgaagaggttcgtccag
gcccgcagggtatatgaggaggacccaggggaggctgtacgcttgtgtgacacgctgcta
gaagaagcagatctggaccctgctgtccgtatcggagacgcttacggcttcctggtggag
caccactgtcaacagggcagctaccaggtggcccaccgtaagctggaggagatgctgaag
cggctgccctccgtcaacgtgagctactacgtgagccagcgcagcctggaggcgctgcag
ctagccgtgggcgtgcccctggggggggtccggggggcgccgctgggccgcagcacccgc
agggacagcggaggggaggaggacgaggtggaagaggaggaagttctagaagcccatcag
ggggactga
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integrated database retrieval system
