Conger conger (European conger): 133126415
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Entry
133126415 CDS
T10633
Symbol
smg9
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
ccog Conger conger (European conger)
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133126415 (smg9)
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
133126415 (smg9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
URGCP_GTPase
AAA_33
AAA_18
AAA_30
AAA_16
AAA_22
MeaB
AAA_14
Motif
Other DBs
NCBI-GeneID:
133126415
NCBI-ProteinID:
XP_061094602
LinkDB
All DBs
Position
1:81694323..81707652
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AA seq
505 aa
AA seq
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MSESGHSQPGMYGQGRRRRRRREREPGPPGQNLSGPGREREYNPRERRDGSEEPPGPVLQ
KTPIILAKPPGERTKPSQSAPISTPLEKPIMLIKTREEGGKPGTPPDVTLPAPGPGAAKL
EREGQRPTQPVYQIQNRGMGSTASSSAMDPVIGQTKLLPPEKMKHSIKLVDEQMNWCDSA
MEYLRDQTDMLVVGVIGLQGTGKSTVLSLLSANTPEEDQRAYVFMAQSQEIKERGGNQSS
GIDFYITQERVIFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQMAAFLFTV
CHVVIVVQDWFTDINLYRFLQTAEMLKPSTPSASHDSSSSSGSEEGSEYYPHIVFLQNKA
RRDDFCPRNLRKMHTAVDKLMAHSHLKYKGTLSMLDSNTFPGLGRDYLETEVNLFLLPQL
ENEGEDALTRGGPGSAPLFSLLPGYRGHPSFSSLASKLRSQVLSLSRCQLSHTILTEKNW
FHYAARIWDGVKKSSALSEYSRLLS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtcggggcatagccagcccggaatgtacggacagggacggaggagaagacga
cgccgagaacgggagcctggtccgcctggacagaacctatccggtccgggccgtgagcga
gaatataacccccgggagcgcagggatggcagcgaagaaccacctggccctgtccttcaa
aagacccctatcatactggcaaaaccccctggagaaaggactaagcccagtcaaagtgcc
cccataagcacgcccctggaaaagcctatcatgctcattaaaaccagggaggaaggaggg
aaaccagggaccccccctgatgtaacccttcctgcccctggcccgggggctgctaagttg
gagagggaggggcagcgtcccacccagcctgtgtaccaaatccagaacaggggaatgggc
tcgactgcgtccagcagcgctatggaccctgtgattggccagacaaagctcctcccacct
gagaaaatgaagcacagcattaagctggtggatgagcaaatgaactggtgtgacagtgct
atggagtatctgcgggaccagacagacatgctggtagtgggagttattggcttacaggga
acgggcaagtccactgtcctgtcactgctgtcagctaacacgccagaagaggaccagagg
gcttatgtgtttatggcacagagtcaggagatcaaggagaggggaggtaaccagagcagt
ggaattgacttctacatcacccaggagagagttatctttttggacacacagcccatcttg
agtccctccattttggatcatctcatcaataatgaccgcaaactgccaccagaatacaat
ctcccccatacgtatgtggaaatgcagtccctgcaaatggctgcctttctcttcactgtg
tgccatgtggtgattgtggttcaagattggttcacagacatcaacctctacaggttcctc
cagaccgccgagatgctgaagccatccaccccatctgccagtcatgacagctctagctca
tctggctctgaagagggatccgagtactaccctcatatcgtgttcctgcagaacaaggcg
aggagggatgatttctgtcctcggaacctgaggaagatgcacacggccgtggacaagctg
atggcacactctcaccttaagtacaaaggcacactgtccatgctggactctaacaccttc
cctggccttgggcgagactacctggagaccgaggtcaacctgttcctgctgccacagctg
gagaatgagggggaggacgctttgacacggggagggcctggctctgcccccctgttctcc
ctgcttcctggttacaggggacaccccagcttctcctcgttggcttccaagttgcgcagc
caggtcctgtccctgtctcgctgccagctctcccacaccatcctcactgagaagaactgg
tttcactacgcggctcggatctgggatggggtgaagaaatcctcggctctctcggagtac
agccggctgctttcctaa
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