Conger conger (European conger): 133135442
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Entry
133135442 CDS
T10633
Symbol
polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ccog Conger conger (European conger)
Pathway
ccog03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
133135442 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccog03021
]
133135442 (polr1a)
Enzymes [BR:
ccog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
133135442 (polr1a)
Transcription machinery [BR:
ccog03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
133135442 (polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
133135442
NCBI-ProteinID:
XP_061108433
LinkDB
All DBs
Position
8:complement(29724428..29778763)
Genome browser
AA seq
1691 aa
AA seq
DB search
MFLGKDVPWRQLEGMSFGMYSSEEIRKLSVKTITNNRFLDNVGNPATNGLYDLSLGPLDA
KEVCATCMQDFNNCPGHLGHIDLPLPVYNPLFFDKLYLLVRGSCLSCHMLTCPRAAVHLL
LNQLRVLEVGALQAVDDLEAELNQFLEGNAQASGFEIQEVLEDFSTGVIREHSERGCGSP
VKHICERKSNLITKFWRVHMVSRRCPICKTGRTQVRKEHNSKLIVILPTAMCKGNKKEGE
TEVIEDSQLGKRGYLTPSIAMEHVAKLWEKEGFFLKYLFSGMEACHKNGFSPNMFFLELL
VVPPSRYRPINRLGDQMFTNGQTVNMQAVMKDCSIIRKLLVLMAAEKARSLSNSGEELEE
EATISKTDQDILVSLPGPTITDKFYNVWIRLQSHVNIVFDSDMDKMMTEKFPGIRQVLEK
KDGLFRKHMMGKRVDYAARSVICPDMYIGINEIGIPMVFATKLTYPQPVTPWNVKELRQA
VMNGPNIHPGASMVINEDGSSTVLSATNHTQREAIAKQLLTPSHGPQKMPMKIVNRHIKN
GDVLLLNRQPTLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELG
RAEAYALVSTYQQYLVPKDGKPLAGLIQDHMVSGTSMTMRGCFFTHDQYMELVYRGLTDQ
RGRVALLPPALLKPHALWTGKQVVSTLLLNVIPENHLPLNLTGKAKIPSKAWVKYPPRPI
PGYQPDSMCESQVIIRQGELLVGVLDKAHYGSSAYGLVHCCYELYGGETSSHLLSCLARL
FTAFLQLYRGFTLGVEDILVKPRANKKRTKIIAESIKCGAQALRTAFNIPSTALESEARD
RWQDAHLNPDQRDFNTVDLKFKEVASLVNNDINKVCMPQGLHRHFPENNLQLMVQSGAKG
STVNTMQISCLLGQIELEGRRPPLMPSGKSLPCFQPYDVSPRSGGFVSGRFLTGIKPPEY
FFHCMAGREGLVDTAVKTSRSGYLQRCVIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGL
DIPKTQFLQPRQLPFIQDNYEVIRKSNCLDEVLGRMDSEAAASHFRALRKWKARRVVASS
RDGPFLLFSQKKLSKQKRQSEQGDLSTGRDKATLQLVERWRSLDDSKRSKYTRKSLRCPE
PCLAHFRPDISFGSVSETFDVIMESYLSKELETDRLRQLLQLKWQRALCDPGEAVGLLAA
QSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMIASSSIKTPMMRVPVLSTKRALK
KVQTIRKRLTRVCLAEVLQRLDVQEIFRVDGKRQKNRVFKLTFHFLPPERYQDDNLLSPQ
QILRYMETRFFRILLEAIKKRSAKLASINRVDMRKATQKDSDRDTGDSQDSLGNSDGEVV
AEEGGEIVDGEADEGDADATDTKRREKQEEEVDYESEEGEDEDERDEQAEQEETSMEMEV
EVDKEQEEECTVPPGLADCGKPDESQSQDMLRVNAVLDISPAIETYTYDCENGLWCEVSL
ALPVSKVHFDLTSLVGTQAQSAVVHETKGITRCLLTEVTTPQGTKELMLNTEGINLQELF
KYSEILDLNRLYSNEIHAMANTYGIEVALRVIEKEIKDVFAVYGIEVDPRHLSLVADYMC
FEGMYKPLNRFAIQSNSSPLQQMTFETSYKFLKQATMLGSHDSLQSPSARLVVGKVVKGG
TGLFDLKQPLQ
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgtttcttggcaaagatgtaccatggaggcaactcgaaggcatgtcgtttggcatgtat
tcatcagaagaaatcaggaagttgagtgtgaagacaatcaccaacaacagatttctggat
aatgttggcaaccccgccaccaatggcctgtatgatctgtcacttgggcctctggatgcc
aaagaagtgtgtgcaacatgcatgcaggatttcaacaattgccctggacacctggggcac
atcgacctgccactgcctgtctacaaccccctcttctttgacaaattgtacctgttggtt
cgggggtcttgcctgagctgccacatgctgacatgcccaagggcagctgtccacctgctt
cttaaccagcttagggtgctggaggtaggggcactgcaggctgtggatgacctggaggct
gaattgaatcagttcctggagggtaatgcccaggccagtgggtttgagatccaggaagtg
ctggaggacttttctacaggagtgattagagagcacagcgagagaggctgtggttcacct
gtcaaacacatctgtgagagaaagagcaacctcattacaaagttttggagggtgcacatg
gtctcccggagatgtcccatctgcaaaactggccgaactcaagtgcgtaaagagcacaac
agcaagctgattgtgattctgccaacagcaatgtgtaaagggaacaagaaagagggtgaa
acagaagtaatagaagattcacagcttgggaaaaggggctacctgactcccagcatcgca
atggagcatgtggccaaactgtgggagaaggaaggtttcttcctgaagtacttgttctca
gggatggaagcttgccataagaatggcttcagccccaatatgttctttctggaattgctt
gtggttcctccctctaggtaccggcccatcaaccgcctgggcgaccagatgttcaccaac
ggtcagactgtcaacatgcaggctgtaatgaaagactgcagcatcatcaggaagctgctg
gttctcatggcggctgagaaggcacggtcgctcagcaacagtggagaagaactggaggag
gaagcaaccatcagcaagactgaccaggacatcctggtaagtcttccaggtccgacgatc
acggacaagttctacaacgtatggatccgtctgcagagccacgtcaacattgtctttgac
agcgatatggacaagatgatgacagaaaaattccctgggattcgtcaggttctggaaaag
aaggatggacttttccggaaacacatgatggggaaacgtgttgactatgcagcacggtca
gtcatctgccctgacatgtacattggaatcaatgagatcggaataccaatggtgtttgca
acaaagctgacatacccccagccggttacgccgtggaacgtgaaggagctgcggcaggca
gtgatgaacggacccaacatacacccaggtgcctccatggtcattaatgaggacggctcg
agcactgtgctgagtgccaccaaccacacccagcgggaggctatcgccaagcagctgctc
acgccctcccatggccctcagaaaatgccaatgaaaattgtgaaccgacacataaagaat
ggagacgtgctgctcctgaaccgacagcccacgctccatcgtccgtccatccaggcacac
tgtgctcgcatcctgcctggggagaaagtcctgcgactgcactacgccaattgcaaggcc
tacaacgccgactttgacggagacgaaatgaacgcgcactttcctcagagtgagctgggc
cgagccgaggcgtacgcactcgtcagcacctaccagcagtacttggtgcctaaggatggg
aaaccgttggctgggttgatccaggatcacatggtgtctggtaccagcatgaccatgagg
ggctgcttcttcacccacgaccagtacatggagctggtctaccgtggcctcactgaccaa
agagggcgggtggcgctgctcccacccgccctgctcaagcctcatgccctctggacgggc
aaacaggttgtgtcaacattgctgctgaatgtgattcctgaaaaccacctacccctcaac
ctgacaggcaaagcaaagatccccagcaaagcctgggtaaaatacccaccccgccccatc
ccagggtaccagcccgattccatgtgcgaatcccaggttattatacgtcagggtgagctg
ttggtgggggtgttggacaaggcccactatggcagctcagcctatggactggtacactgc
tgctatgagctgtatggtggggagaccagcagccaccttctgagctgcctggcacgcctc
ttcactgccttcctgcagctttaccggggattcaccttgggtgtggaagacattttggtc
aaacccagagcgaacaagaagaggactaagattattgcagagtccattaagtgcggtgct
caggctctgcgaacggccttcaacatcccctctactgccttggagagtgaggcacgtgat
cgctggcaggacgcccaccttaaccctgaccagcgtgacttcaacactgtggacctcaaa
ttcaaggaggtggccagccttgtcaacaatgatatcaacaaggtttgtatgccgcaggga
ctgcaccgccacttcccggagaacaacctccagctgatggtgcaatctggggccaagggc
tccaccgttaacaccatgcagatctcctgcctactgggtcagattgagttggagggccga
cgcccacccctgatgccttctgggaagtcgctaccatgttttcagccctacgacgtgtcg
ccccgctcaggggggtttgtctctggccggttcttgacaggaatcaagcctccggagtac
ttcttccattgcatggctggtcgggaggggttggtagacaccgctgtgaaaaccagtcga
tcagggtatctgcagaggtgtgtcattaagcacctggaaggcttagtggtacagtatgac
ctgacggtgagggacagcgacggcagtgttgtgcagttcctgtatggggaagatggcctg
gacatcccaaaaacacaattcctgcagcctcgccaactcccctttatacaggacaactat
gaggtcatcaggaagtccaattgcttggatgaagtgctgggtagaatggactctgaggca
gcagccagccacttcagagcccttcggaagtggaaggccaggcgggtcgtggcctcttct
agggatgggccattcttgctcttctcccagaagaaactgtcaaaacagaaacgccagagt
gagcagggggacctgtctactggacgcgacaaagccacactgcagctggtggagcgctgg
cgttctctcgatgattctaaacgcagcaaatacacaagaaagtcattgcgctgccccgag
ccctgtctggcccatttccgcccagacatctcctttgggtcagtctctgagacatttgat
gtcatcatggaatcctacctctctaaggaactggaaactgacagactgaggcagctgctt
cagctgaagtggcagagagcactgtgtgatccgggtgaggctgtggggctgctggctgcc
cagagcatcggggagccctccacccagatgaccctgaacactttccattttgctggcagg
ggagagatgaacgtaacactgggaatcccaaggctgagggagatcctgatgatcgccagc
tccagcataaagacccccatgatgcgtgttcccgtgctgagcactaaaagagcactgaag
aaggtccaaaccatccggaagaggttaacacgtgtttgtctggcagaggtgttgcagagg
ctagatgtgcaggagatatttcgggttgatggaaagcgtcagaaaaaccgggtcttcaag
ctcacattccacttcctgcctccagagcgctaccaagatgataatcttctgtccccccag
cagattctgcgctatatggaaactaggttcttccgcatcctgttggaggccataaagaag
cggagtgccaagctggcatccataaacagggtagacatgcggaaggccactcagaaggac
agtgaccgggacactggtgattcccaggacagcctgggtaacagcgatggcgaagtggta
gcagaagagggcggtgagattgtggacggcgaagccgatgagggagatgctgatgctaca
gacaccaaacggagggagaagcaggaggaggaggtggattatgagagcgaagagggggag
gatgaggatgagagggatgagcaggcagagcaagaggaaacgtctatggagatggaggtg
gaggtggataaagagcaagaggaggagtgtactgtgccacctgggcttgctgactgtggc
aagccagatgagtcgcagtcccaggatatgctgagggttaatgctgtccttgacataagc
ccagccatcgagacctacacatatgactgcgagaacggcctgtggtgtgaggtatcgctg
gctctacctgtcagcaaggtgcactttgatctgacatccctagtagggacacaggcacag
agtgcggtcgtgcatgagaccaagggcatcactcgctgcctgctgactgaggtgaccaca
ccacagggcaccaaagagctaatgctcaacactgagggcatcaacctacaggagcttttc
aaatacagcgagattttggacctgaaccggttgtactccaatgagattcacgccatggcc
aacacatatggcatagaggtggcactgagggtcattgagaaggagatcaaagatgtcttt
gcggtctatggtattgaggtagacccacggcacttgtccctggtggcagattacatgtgc
tttgagggcatgtacaagcccctcaaccgctttgctatccagtccaactcctcccctttg
cagcagatgacgtttgaaaccagctacaagtttttgaagcaggccaccatgcttggttcc
catgacagcctgcaatctccttcagcccgtctggtggttgggaaagtggtgaaggggggc
acggggctctttgacttgaaacagccactccagtag
DBGET
integrated database retrieval system
