Conger conger (European conger): 133139136
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Entry
133139136 CDS
T10633
Symbol
col9a3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
ccog Conger conger (European conger)
Pathway
ccog04510
Focal adhesion
ccog04512
ECM-receptor interaction
ccog04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133139136 (col9a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133139136 (col9a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133139136 (col9a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ccog00535
]
133139136 (col9a3)
Proteoglycans [BR:
ccog00535
]
Extracellular matrix (ECM) proteoglycans
Others
133139136 (col9a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
133139136
NCBI-ProteinID:
XP_061114454
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Position
10:complement(30060409..30085524)
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AA seq
677 aa
AA seq
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MAAFSALWLLFLCQLLTSLAQRPGPRGPPGLPGPPGPGGKDGIDGKSGPPGLPGKPGPKG
KAAEAGGPGGAGLPGLPGVDGLTGPDGPAGKDGPPGVRGDAGPPGPAGPPGRGRPGAPGQ
PGANGLQGGVGPQGTLGAEGPQGLPGLPGLDGPPGLPGALPEGAGEVLCPAICPPGPAGA
PGMPGFKGHTGHKGDKGEAGKDGEKGDAGPPGPPGIPGTVGLQGPRGLRGLQGPMGAVGN
RGLPGFRGKPGIAGVIGKTGDAGEKGPEGFKGPKGEIGKIGPKGVPGGSGPKGEPGIPGR
DGKDGTPGLDGEKGDAGRSGVPGEKGPNGLPGLQGKAGGKGAKGGVGNQGEMGEAGPSGE
PGIPGEIGVPGDRGEAGPRGKAGGIGQIGNTGPQGVKGFQGVKGALGDAGLPGPTGIRGG
FGDRGPVGASGPKGEMGVAGSDGLPGENGEPGPFGPVGQKGQSGKRGEVGPKGVVGPQGE
LGARGAPGKPGLMGFQGEQGQPGIAGKTGVPGKLASEQHIRELCGGMIDDQIAQLAANLR
RPLAPGMVGRPGPAGSPGQPGAAGSIGHPGNRGPPGYRGLPGDLGDPGPRGDVGEPGDKG
PIGKAIEGPMGDQGYQGLPGVLGIVKHGRDGAPGDPGEAGEAGRTGSTGHQGSPGICDTS
ACQGASIAGKSSSPKNH
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgttctcagctctttggctactctttctttgccagcttttgacatctctagca
cagagacccggccctcgaggaccacctggcctgccaggacccccaggacccggaggaaaa
gatggcatcgatggtaaatccggcccgcctggacttcctggaaaacctgggccgaaagga
aaagcagcggaggctgggggcccaggaggtgcaggattgcctggacttccgggagtggac
ggtctgactggtcctgatggcccagcggggaaagatgggccaccaggagtaagaggcgac
gccggaccacctggcccagctggacctcctggcagagggagaccaggagccccagggcaa
cctggagccaatgggctgcaaggcggagtagggccacaggggacattgggtgctgaggga
ccccaaggacttcccggcctccccggtcttgatggccccccaggtcttccgggggccctc
cctgaaggcgctggtgaagttctgtgtccagccatctgtccaccaggcccagctggagct
ccgggcatgccagggttcaagggtcacacaggacacaaaggagacaagggagaggctggg
aaggatggagaaaagggcgatgctggcccacctgggcctcctggcatccctggcactgtt
ggcctccagggccctcggggtttgaggggactccagggcccaatgggtgcagtcggaaac
aggggtttaccaggtttccgtggcaaacctggaatcgctggtgtcattgggaaaacaggt
gatgctggagagaaaggacctgaaggtttcaaagggccaaagggggaaattggcaaaatt
ggtcccaaaggtgttcctgggggatctggacccaaaggagagcctggcatacctggcaga
gatgggaaagatggcacaccggggttagatggagagaagggtgatgccggcagatctggg
gttcctggtgaaaaaggtcccaacggccttccgggtttacaaggaaaggctggtggaaaa
ggagctaaaggaggggttggtaatcaaggagagatgggagaggcaggtccctctggagag
ccaggtattcctggtgagattggagttccaggagacaggggagaggctggacctagagga
aaggcaggaggcattggacaaataggaaacaccgggcctcagggtgtcaaaggcttccag
ggtgtgaaaggtgctcttggggacgctggtcttcctggcccaacaggaatccgtggagga
tttggcgacaggggtccagtcggagcatcaggacccaaaggggaaatgggtgttgcagga
agtgatggtctaccaggagagaacggagaaccgggcccatttggtcctgttggacagaaa
ggccagtctggaaagaggggtgaggtcgggccaaagggtgtggttggtccccaaggagaa
cttggagccagaggggcccctgggaagcctggactcatgggcttccaaggcgagcagggc
cagcctggcattgctggaaagactggtgttcctggtaaactggcaagtgaacagcacatc
agagagctgtgtggaggaatgatcgatgaccagattgcccaactggctgccaacttgagg
agaccactggcaccgggtatggtgggtcgtcctgggcctgctgggtcccctgggcaacct
ggtgccgctggctctataggacatccaggcaaccgtggaccaccaggctacagagggctg
ccaggagacctgggtgaccctggtcccagaggtgatgttggtgaaccaggcgacaaagga
cctattggcaaggcaattgaaggtcccatgggagaccaaggctatcagggtctccccgga
gtgctaggaattgtgaaacacgggcgtgacggtgcccctggagatccaggtgaggctggt
gaagcaggccgaacgggcagcactgggcaccagggatcacctggaatctgtgacacatca
gcttgccagggagcatcgattgcggggaaatcttccagtcccaagaaccattaa
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