Conger conger (European conger): 133140269
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Entry
133140269 CDS
T10633
Symbol
skic3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
ccog Conger conger (European conger)
Pathway
ccog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133140269 (skic3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133140269 (skic3)
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
133140269 (skic3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_16
TPR_14
TPR_17
TPR_19
TPR_8
TPR_11
TPR_CcmH_CycH
TPR_12
TPR_9
ANAPC3
ARM_TT21_C
PknG_TPR
TPR-S
TPR_30
Motif
Other DBs
NCBI-GeneID:
133140269
NCBI-ProteinID:
XP_061116038
LinkDB
All DBs
Position
11:complement(19593011..19626786)
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AA seq
1566 aa
AA seq
DB search
MSSKEVKSALKNAREAIKNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAASELEQPDQAQ
TAYRKACDLEPQQLLAWQGLANLYEKSTQTDFTVELPKVYQRLITLYESSDKAKCYEVGR
KLVDIYHVEKNHLQVARLWLRLIQLREEAEGGLGRSELLQLWQQMTELLADSVEEQDNET
QQHLLNAFEKAMSLTDSTPTVDHKKLSANYVTCLSKLPHEEVKMKEACEAMLTLYPTHAF
PLEVLSSHYLHSGACSEEASRCFARLLELDADSGPAHMGLGVQALQGGRYEEAVRSLAKG
LKRSRSCSLGWLSLAQAQLKLHRYPDSIASCRQGLDAIGGEAGGAESRRSLLRLKAEALV
RGGAEQYADQALETLAQLADADNDPDLVSLRGRAYLQKGLVDQALQVSAELLEAHPAQPE
VLVLRGLAQLAHDQLPQAEESFLKALEQGPGSGECLFLLGRLYWDMGEETRRDKAKAHAH
LLKAAKLDPHLGKTFRYLGHYYRDAAQDRGRARGCYKRAFELDASDTESGAATVDLSMEQ
GDMDSALAILAAVTEKATPGSAKWAWMRRGLYHLQIGQHPQAIADLQAALRADTQDWVCW
ECLGEAYLKRRSFTAALKAFDKARQLNPASIYSLYQMAAIKQTLGKFPEAVSEYMQIIAR
EEYVPALKGLGECHLALAQGAVGDYLDGRAVDLLQLAVEFLFRALQLRPDLSCLWKVLGD
VCTSVHAVSPSRARVLVPGSLAGTEPSDQKHTLDQAQILKLGERCYGRALKLMSEAPNLW
HDLGLNYYHQARRLIGQEEEREVCLEKALQCVKKAVKLDSTKHTYWNALGVVAMSTGIEN
FTLAQHSFIKSLGVDANNVVAWTNLGALYLKKENIELSHEAFKIAQSLEPLYVNCWIGQA
LIAEAVGSYDTMDLFRHTTELSTHTEGVKGYAFWVCSTLLDKSNRESELYRYNIVQMNAV
SAAQVALCKYTERIQTDSGAFTMLGFLNEHLNLKRQATQAYLRAMELLEPMGPSEELNFA
LRNYGRALCNTDQWEQAVRIYSSTPQGELHDITGLALAFFRAGHLQDSVSAYERALGVAS
SEKERAYILTALALLQHRMGNMDAAKTLLFKCSVLKEPIAESLLSLCALGLVRGDATLAS
AALAELLKQGGAVRGGEERCLLTCALLAVQGNYSAVQREAARAVHSNPGNPTLWALLSRL
VPQYYPQKARGGAVAGSVACHSSMTQGKKALLYSGVNQLAYGRHSGEDPRRNALKTIQRA
ALLCPDDPGVWAALMAACHTEATACVLSGSAPRRQGLEGMLMSRVSEKVKGVEDQEKPQA
QALQSWVLQQAVTSLKQAGQRSEAEALCTQVLSVTPEDPAVFLLLRQVQCEVLLLSGAGT
TLPSSVLDQLSSAVLANHSSVSAWHWLAEVYRAQGLLVQAVMAYRQSLQLASQQGQFGGQ
LSSLLRLALLALRPCMAGVPGCEWKDLVSEATTEALKLGPSPVARLLLALLQFALKMGAR
ETRRLLERIVYPSGPGCPETVVSVARWYLLRHLHAKDDLELMDTLLDQARAVKDKRLLEL
HKRLCP
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaaagaggtgaagtctgcgttgaaaaacgcaagggaagccatcaaaaacaaa
gagtacaaagaagccttaaagcattgcaaggctgtgctgaagcaggagaagaataactac
aatgcctgggttttcatcggcttggcggcgagcgagctggagcagccggaccaggcgcag
acggcctacaggaaggcctgtgacctggagccccagcagctgctggcctggcaggggctg
gctaacctgtatgaaaaaagcacccagacggatttcacagtcgaactaccaaaggtctac
cagagactcataacgctgtacgaaagttcagacaaggcaaaatgctacgaagtgggacgg
aagttggtcgacatctatcacgtagagaagaatcatttgcaggtggctagactgtggctt
aggctgatccagctgagggaggaggctgaggggggtttggggaggtctgagttgctgcag
ctatggcagcagatgaccgagctcctggctgacagcgtggaggagcaggacaatgaaacc
caacagcacttgttaaatgcttttgaaaaggccatgtccctcacggacagtacccccaca
gtggaccacaagaagctctcagccaattacgttacgtgcttatcaaaactcccgcatgag
gaggtgaagatgaaggaggcctgtgaagccatgctgaccctctatcccacccacgccttc
cccctggaggtgctcagctcacactacctccactctggtgcctgcagtgaggaggcttct
cgctgcttcgcacggctgctggagctggatgcagacagcgggccggcccacatgggcctg
ggggtgcaggccctgcagggggggcggtacgaggaggccgtgaggagcctggctaagggt
ctgaagcgctcacggtcctgttcgctggggtggctcagtctggcccaggcccagctcaaa
ctgcacagataccctgacagcatcgcctcctgcagacagggactggatgcgattggcggg
gaggccggaggggcggagtcgaggaggagcctgctgcggttgaaggcggaggctttggtg
aggggcggggcagagcagtacgcagaccaggccctggagacgctcgcacagttggctgat
gccgataacgaccctgatctggtgtcactaagaggaagggcttatctgcagaagggattg
gtggaccaagctcttcaggtgtccgctgagcttctggaggctcaccctgcccagccggag
gttctggtcctgaggggactggcacagctggcccacgaccagctcccacaggctgaggag
agcttcctgaaggccctggagcaggggccaggttcgggggagtgcctcttcctgctcgga
cggctgtactgggacatgggggaggagacgcgccgcgacaaggccaaggctcacgcccac
cttctcaaggctgccaagctggaccctcacctggggaagaccttccgctacctggggcac
tactaccgagacgcggctcaggaccgcgggagggcccggggctgctacaagcgggcgttt
gagctggacgcctccgacacggagtccggggccgccaccgtggacctcagcatggagcag
ggagacatggactctgctctggccatcctggcggcagtgacggagaaggccactccgggc
tcggcgaagtgggcctggatgaggaggggactgtaccacctgcagatcgggcagcacccg
caagccatcgcagacttgcaggcggcactgcgggctgatacccaggattgggtgtgctgg
gagtgtctgggcgaggcctacctgaagaggcggagtttcacggcagcgctcaaagccttt
gacaaagcccggcagctcaaccccgcctccatctacagcctgtaccagatggctgccatc
aagcagaccctggggaagtttccggaagccgtctccgagtacatgcagatcatcgcccgg
gaggagtacgtcccggcgctgaaaggtctgggagagtgtcacctggccctggcccagggg
gcagtgggggactatctggacgggcgagcggtcgacctgcttcagctggcggtggagttc
ctcttcagagcactgcagctgcggccggacctgtcctgcctgtggaaggtcctgggggac
gtgtgcacctcggtccacgccgtctcccccagccgggccagggttctggtaccaggatca
ctggctggaacagagccctccgaccagaagcacaccctcgaccaggcccagatcctcaaa
ctcggggaaaggtgctacggccgggcgctgaagctcatgtccgaagctcccaacctctgg
cacgatctcggcctcaactactaccaccaggcccgccgcctgattggccaggaggaggag
agggaggtgtgtctggagaaagccttgcagtgcgtgaagaaggctgtgaagctggacagc
accaaacacacctactggaacgccctgggggtggtggccatgagcacaggcatagaaaac
tttactctcgctcaacactcctttattaagtctttgggcgtggatgcgaataatgttgta
gcttggaccaacctgggggccttgtatctgaagaaggaaaatattgagctctctcatgaa
gccttcaagatcgcccagtcacttgagcccctgtacgtcaactgctggatcggacaggct
ctgatagcggaggcggtgggcagctacgacaccatggatctgttcagacacaccactgag
ctcagcacccacacggagggcgtgaaggggtatgcgttctgggtgtgctccaccctgctg
gataagagtaacagggagtctgagctctaccgctacaacatcgtccagatgaacgccgtg
tcggccgcacaggtggccctgtgcaagtacacggagaggatccagacggactcgggtgca
ttcaccatgctggggttcctgaatgagcacctgaacctgaaacgccaggctacccaggcc
tacctgagagcgatggagctgctggaaccgatgggcccctctgaggagctgaacttcgcc
ctcagaaactacggccgtgccctctgcaacacagaccagtgggagcaggcggtgcgcatt
tactcctccacaccacagggggagctgcacgacatcacagggctggcgctcgccttcttc
agagccgggcacctgcaggacagtgtgagcgcctatgagagggctctgggcgtggcctcc
agtgagaaggagagagcctacatcctcactgccctggccctgctgcaacacaggatgggc
aacatggacgctgccaaaactctgctctttaagtgctccgtgctcaaggagccaatcgca
gagagcctgctgtcgctgtgcgccctgggattggtgcgtggagacgccactctggccagc
gccgccctggcagagctgctgaagcagggcggggccgtccggggcggggaggagcgctgc
ctgctcacctgcgccctgctggccgtgcaggggaactacagcgccgtgcagagagaggca
gctcgtgcagtgcacagtaacccgggcaacccaactctctgggcactactatccagactg
gtgccgcagtactacccccagaaggccaggggcggtgcagtagctgggagtgtagcttgc
cactccagcatgactcaaggaaagaaggcgctgttgtacagtggagtgaaccagctggcc
tatgggaggcactcgggagaagaccccaggagaaacgcgctgaagaccattcagagagct
gcgctgctctgccctgatgacccgggggtgtgggcggccctgatggctgcctgtcacacg
gaggccaccgcctgcgtgctgtcaggctccgccccccgccgccagggcctggagggcatg
ctgatgtcacgcgtgtccgagaaagtaaagggtgtggaggatcaggagaagccccaggct
caggccctgcagagctgggttctgcagcaggctgtgacctcactcaaacaggccggccag
cgctcagaggctgaggccctctgtacacaggtgctgagtgtgactccagaggacccggcc
gtgttcctgttgttgaggcaggtccagtgtgaggttctgctgctgtccggtgccggtacc
acccttccctcctccgtactggaccagctcagctccgccgtcctggccaatcacagctcc
gtatccgcctggcactggctggcggaggtgtaccgggcccaggggctgctggtgcaggcg
gtgatggcgtacaggcagagcctccagttggcctcccagcagggccagtttggggggcag
ctctccagcctgctgcggctggccctgctggccctccggccctgcatggcgggcgtcccg
ggctgtgagtggaaggacctggtgtcggaggccaccacggaggccctgaagctgggcccc
tctcccgtggccagactgctcctggccctgctgcagttcgccctgaagatgggggccagg
gaaacgcgccgtctcttggagaggattgtctacccctccgggcccggttgcccggaaacg
gtggtgtcggtagcacgttggtacctcctccgccacctccacgccaaggacgacctggag
ctgatggacaccctattggaccaggcccgagcagtcaaggacaaaagactcctggagttg
cacaagcgactctgcccttag
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integrated database retrieval system