KEGG   Conger conger (European conger): 133140269
Entry
133140269         CDS       T10633                                 
Symbol
skic3
Name
(RefSeq) superkiller complex protein 3
  KO
K12600  superkiller protein 3
Organism
ccog  Conger conger (European conger)
Pathway
ccog03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccog00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    133140269 (skic3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccog03019]
    133140269 (skic3)
Messenger RNA biogenesis [BR:ccog03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     133140269 (skic3)
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_16 TPR_14 TPR_17 TPR_19 TPR_8 TPR_11 TPR_CcmH_CycH TPR_12 TPR_9 ANAPC3 ARM_TT21_C PknG_TPR TPR-S TPR_30
Other DBs
NCBI-GeneID: 133140269
NCBI-ProteinID: XP_061116038
LinkDB
Position
11:complement(19593011..19626786)
AA seq 1566 aa
MSSKEVKSALKNAREAIKNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAASELEQPDQAQ
TAYRKACDLEPQQLLAWQGLANLYEKSTQTDFTVELPKVYQRLITLYESSDKAKCYEVGR
KLVDIYHVEKNHLQVARLWLRLIQLREEAEGGLGRSELLQLWQQMTELLADSVEEQDNET
QQHLLNAFEKAMSLTDSTPTVDHKKLSANYVTCLSKLPHEEVKMKEACEAMLTLYPTHAF
PLEVLSSHYLHSGACSEEASRCFARLLELDADSGPAHMGLGVQALQGGRYEEAVRSLAKG
LKRSRSCSLGWLSLAQAQLKLHRYPDSIASCRQGLDAIGGEAGGAESRRSLLRLKAEALV
RGGAEQYADQALETLAQLADADNDPDLVSLRGRAYLQKGLVDQALQVSAELLEAHPAQPE
VLVLRGLAQLAHDQLPQAEESFLKALEQGPGSGECLFLLGRLYWDMGEETRRDKAKAHAH
LLKAAKLDPHLGKTFRYLGHYYRDAAQDRGRARGCYKRAFELDASDTESGAATVDLSMEQ
GDMDSALAILAAVTEKATPGSAKWAWMRRGLYHLQIGQHPQAIADLQAALRADTQDWVCW
ECLGEAYLKRRSFTAALKAFDKARQLNPASIYSLYQMAAIKQTLGKFPEAVSEYMQIIAR
EEYVPALKGLGECHLALAQGAVGDYLDGRAVDLLQLAVEFLFRALQLRPDLSCLWKVLGD
VCTSVHAVSPSRARVLVPGSLAGTEPSDQKHTLDQAQILKLGERCYGRALKLMSEAPNLW
HDLGLNYYHQARRLIGQEEEREVCLEKALQCVKKAVKLDSTKHTYWNALGVVAMSTGIEN
FTLAQHSFIKSLGVDANNVVAWTNLGALYLKKENIELSHEAFKIAQSLEPLYVNCWIGQA
LIAEAVGSYDTMDLFRHTTELSTHTEGVKGYAFWVCSTLLDKSNRESELYRYNIVQMNAV
SAAQVALCKYTERIQTDSGAFTMLGFLNEHLNLKRQATQAYLRAMELLEPMGPSEELNFA
LRNYGRALCNTDQWEQAVRIYSSTPQGELHDITGLALAFFRAGHLQDSVSAYERALGVAS
SEKERAYILTALALLQHRMGNMDAAKTLLFKCSVLKEPIAESLLSLCALGLVRGDATLAS
AALAELLKQGGAVRGGEERCLLTCALLAVQGNYSAVQREAARAVHSNPGNPTLWALLSRL
VPQYYPQKARGGAVAGSVACHSSMTQGKKALLYSGVNQLAYGRHSGEDPRRNALKTIQRA
ALLCPDDPGVWAALMAACHTEATACVLSGSAPRRQGLEGMLMSRVSEKVKGVEDQEKPQA
QALQSWVLQQAVTSLKQAGQRSEAEALCTQVLSVTPEDPAVFLLLRQVQCEVLLLSGAGT
TLPSSVLDQLSSAVLANHSSVSAWHWLAEVYRAQGLLVQAVMAYRQSLQLASQQGQFGGQ
LSSLLRLALLALRPCMAGVPGCEWKDLVSEATTEALKLGPSPVARLLLALLQFALKMGAR
ETRRLLERIVYPSGPGCPETVVSVARWYLLRHLHAKDDLELMDTLLDQARAVKDKRLLEL
HKRLCP
NT seq 4701 nt   +upstreamnt  +downstreamnt
atgtcgagcaaagaggtgaagtctgcgttgaaaaacgcaagggaagccatcaaaaacaaa
gagtacaaagaagccttaaagcattgcaaggctgtgctgaagcaggagaagaataactac
aatgcctgggttttcatcggcttggcggcgagcgagctggagcagccggaccaggcgcag
acggcctacaggaaggcctgtgacctggagccccagcagctgctggcctggcaggggctg
gctaacctgtatgaaaaaagcacccagacggatttcacagtcgaactaccaaaggtctac
cagagactcataacgctgtacgaaagttcagacaaggcaaaatgctacgaagtgggacgg
aagttggtcgacatctatcacgtagagaagaatcatttgcaggtggctagactgtggctt
aggctgatccagctgagggaggaggctgaggggggtttggggaggtctgagttgctgcag
ctatggcagcagatgaccgagctcctggctgacagcgtggaggagcaggacaatgaaacc
caacagcacttgttaaatgcttttgaaaaggccatgtccctcacggacagtacccccaca
gtggaccacaagaagctctcagccaattacgttacgtgcttatcaaaactcccgcatgag
gaggtgaagatgaaggaggcctgtgaagccatgctgaccctctatcccacccacgccttc
cccctggaggtgctcagctcacactacctccactctggtgcctgcagtgaggaggcttct
cgctgcttcgcacggctgctggagctggatgcagacagcgggccggcccacatgggcctg
ggggtgcaggccctgcagggggggcggtacgaggaggccgtgaggagcctggctaagggt
ctgaagcgctcacggtcctgttcgctggggtggctcagtctggcccaggcccagctcaaa
ctgcacagataccctgacagcatcgcctcctgcagacagggactggatgcgattggcggg
gaggccggaggggcggagtcgaggaggagcctgctgcggttgaaggcggaggctttggtg
aggggcggggcagagcagtacgcagaccaggccctggagacgctcgcacagttggctgat
gccgataacgaccctgatctggtgtcactaagaggaagggcttatctgcagaagggattg
gtggaccaagctcttcaggtgtccgctgagcttctggaggctcaccctgcccagccggag
gttctggtcctgaggggactggcacagctggcccacgaccagctcccacaggctgaggag
agcttcctgaaggccctggagcaggggccaggttcgggggagtgcctcttcctgctcgga
cggctgtactgggacatgggggaggagacgcgccgcgacaaggccaaggctcacgcccac
cttctcaaggctgccaagctggaccctcacctggggaagaccttccgctacctggggcac
tactaccgagacgcggctcaggaccgcgggagggcccggggctgctacaagcgggcgttt
gagctggacgcctccgacacggagtccggggccgccaccgtggacctcagcatggagcag
ggagacatggactctgctctggccatcctggcggcagtgacggagaaggccactccgggc
tcggcgaagtgggcctggatgaggaggggactgtaccacctgcagatcgggcagcacccg
caagccatcgcagacttgcaggcggcactgcgggctgatacccaggattgggtgtgctgg
gagtgtctgggcgaggcctacctgaagaggcggagtttcacggcagcgctcaaagccttt
gacaaagcccggcagctcaaccccgcctccatctacagcctgtaccagatggctgccatc
aagcagaccctggggaagtttccggaagccgtctccgagtacatgcagatcatcgcccgg
gaggagtacgtcccggcgctgaaaggtctgggagagtgtcacctggccctggcccagggg
gcagtgggggactatctggacgggcgagcggtcgacctgcttcagctggcggtggagttc
ctcttcagagcactgcagctgcggccggacctgtcctgcctgtggaaggtcctgggggac
gtgtgcacctcggtccacgccgtctcccccagccgggccagggttctggtaccaggatca
ctggctggaacagagccctccgaccagaagcacaccctcgaccaggcccagatcctcaaa
ctcggggaaaggtgctacggccgggcgctgaagctcatgtccgaagctcccaacctctgg
cacgatctcggcctcaactactaccaccaggcccgccgcctgattggccaggaggaggag
agggaggtgtgtctggagaaagccttgcagtgcgtgaagaaggctgtgaagctggacagc
accaaacacacctactggaacgccctgggggtggtggccatgagcacaggcatagaaaac
tttactctcgctcaacactcctttattaagtctttgggcgtggatgcgaataatgttgta
gcttggaccaacctgggggccttgtatctgaagaaggaaaatattgagctctctcatgaa
gccttcaagatcgcccagtcacttgagcccctgtacgtcaactgctggatcggacaggct
ctgatagcggaggcggtgggcagctacgacaccatggatctgttcagacacaccactgag
ctcagcacccacacggagggcgtgaaggggtatgcgttctgggtgtgctccaccctgctg
gataagagtaacagggagtctgagctctaccgctacaacatcgtccagatgaacgccgtg
tcggccgcacaggtggccctgtgcaagtacacggagaggatccagacggactcgggtgca
ttcaccatgctggggttcctgaatgagcacctgaacctgaaacgccaggctacccaggcc
tacctgagagcgatggagctgctggaaccgatgggcccctctgaggagctgaacttcgcc
ctcagaaactacggccgtgccctctgcaacacagaccagtgggagcaggcggtgcgcatt
tactcctccacaccacagggggagctgcacgacatcacagggctggcgctcgccttcttc
agagccgggcacctgcaggacagtgtgagcgcctatgagagggctctgggcgtggcctcc
agtgagaaggagagagcctacatcctcactgccctggccctgctgcaacacaggatgggc
aacatggacgctgccaaaactctgctctttaagtgctccgtgctcaaggagccaatcgca
gagagcctgctgtcgctgtgcgccctgggattggtgcgtggagacgccactctggccagc
gccgccctggcagagctgctgaagcagggcggggccgtccggggcggggaggagcgctgc
ctgctcacctgcgccctgctggccgtgcaggggaactacagcgccgtgcagagagaggca
gctcgtgcagtgcacagtaacccgggcaacccaactctctgggcactactatccagactg
gtgccgcagtactacccccagaaggccaggggcggtgcagtagctgggagtgtagcttgc
cactccagcatgactcaaggaaagaaggcgctgttgtacagtggagtgaaccagctggcc
tatgggaggcactcgggagaagaccccaggagaaacgcgctgaagaccattcagagagct
gcgctgctctgccctgatgacccgggggtgtgggcggccctgatggctgcctgtcacacg
gaggccaccgcctgcgtgctgtcaggctccgccccccgccgccagggcctggagggcatg
ctgatgtcacgcgtgtccgagaaagtaaagggtgtggaggatcaggagaagccccaggct
caggccctgcagagctgggttctgcagcaggctgtgacctcactcaaacaggccggccag
cgctcagaggctgaggccctctgtacacaggtgctgagtgtgactccagaggacccggcc
gtgttcctgttgttgaggcaggtccagtgtgaggttctgctgctgtccggtgccggtacc
acccttccctcctccgtactggaccagctcagctccgccgtcctggccaatcacagctcc
gtatccgcctggcactggctggcggaggtgtaccgggcccaggggctgctggtgcaggcg
gtgatggcgtacaggcagagcctccagttggcctcccagcagggccagtttggggggcag
ctctccagcctgctgcggctggccctgctggccctccggccctgcatggcgggcgtcccg
ggctgtgagtggaaggacctggtgtcggaggccaccacggaggccctgaagctgggcccc
tctcccgtggccagactgctcctggccctgctgcagttcgccctgaagatgggggccagg
gaaacgcgccgtctcttggagaggattgtctacccctccgggcccggttgcccggaaacg
gtggtgtcggtagcacgttggtacctcctccgccacctccacgccaaggacgacctggag
ctgatggacaccctattggaccaggcccgagcagtcaaggacaaaagactcctggagttg
cacaagcgactctgcccttag

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