Clostridium cochlearium: SAMEA4530647_0236
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Entry
SAMEA4530647_0236 CDS
T06756
Symbol
tmpC
Name
(GenBank) membrane lipoprotein tmpC precursor
KO
K07335
basic membrane protein A and related proteins
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SAMEA4530647_0236 (tmpC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccoh02000
]
SAMEA4530647_0236 (tmpC)
Transporters [BR:
ccoh02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
General nucleoside transporter
SAMEA4530647_0236 (tmpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bmp
Motif
Other DBs
NCBI-ProteinID:
SNV65643
LinkDB
All DBs
Position
1:227853..228932
Genome browser
AA seq
359 aa
AA seq
DB search
MNKKKVVALLSAAIMTVSLFAGCGGGEKKPAEGGKEQLKVGLVTDQGGVNDGSFNQSAHE
GISKAEKELGITQINAIESKQQEQYEPNLKTMAGEADLIVGCGYMMTDAMENVSKQIGEK
KFLIVDSVVKSPNTLSITFKEEEGSFLAGVIAGKMTKTNKVGFIGGKESEVISRFEIGFA
AGVMSVNPEAGKLLKPVNEKTPGKNVKYVDSFDDQQKGIEAAKMLYNSGCDIVFHAAGGV
GLGVFKAAKEMNKWAIGVDSDQAAALPEYKDVILISMEKKVGDAVIDTIKSIQEDKFEGG
KHIVLGIKEDRVGIAPTKHPDLTKEADELSEKYRAAIKEGKFKVPGTRKELLDFKAPEI
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaaaaaggttgtagcccttttatcagcagcaataatgactgtatcattattt
gccggctgtggtggaggagaaaagaagcctgctgaaggtggaaaagaacaattaaaggtt
ggtcttgtaacagaccaaggaggagtaaatgatggttcatttaaccaatcagcacatgaa
ggaatctcaaaagcagaaaaagaattaggaataacacaaataaatgctatagaatcaaag
caacaagaacaatatgagccaaacttaaaaactatggcaggggaagctgatttaattgta
ggctgtggatatatgatgactgatgctatggaaaacgtatccaaacaaataggagagaaa
aagtttttaattgttgactcagttgtaaaatcaccaaatactttatctataacttttaaa
gaagaagaaggatcatttttagctggtgttatagcaggtaaaatgacaaagactaataaa
gttggatttataggtggaaaagaaagtgaagttataagcagatttgaaataggatttgca
gctggagttatgtcagttaatccagaagccggtaaattattaaaacctgttaatgaaaaa
acaccaggaaagaatgtaaaatatgtagactcttttgatgaccaacaaaagggaatagaa
gctgcaaaaatgctttataattcaggttgtgatatagtattccatgcagcaggtggagta
ggtcttggagtatttaaggctgcaaaagaaatgaataagtgggcaataggagttgactct
gaccaagcagcagcattaccagaatataaagatgtaatacttatatccatggagaaaaaa
gtaggagatgctgttatagatactataaagagcattcaagaagacaagttcgaaggtgga
aaacatatagttcttggaataaaagaagatagagttggaatagcaccaacaaaacatcca
gaccttactaaagaggcagatgaattatcagaaaaatacagagcagctataaaagaaggt
aaatttaaagttccaggaacaagaaaagaacttttagactttaaagctccagaaatttaa
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