Campylobacter coli RM5611: YSU_06965
Help
Entry
YSU_06965 CDS
T03167
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
ccoi
Campylobacter coli RM5611
Pathway
ccoi00540
Lipopolysaccharide biosynthesis
ccoi01100
Metabolic pathways
ccoi01250
Biosynthesis of nucleotide sugars
Module
ccoi_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccoi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
YSU_06965
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ccoi01005
]
YSU_06965
Enzymes [BR:
ccoi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
YSU_06965
Lipopolysaccharide biosynthesis proteins [BR:
ccoi01005
]
Lipid A
YSU_06965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
PaRep2b
Motif
Other DBs
NCBI-ProteinID:
AHK75576
LinkDB
All DBs
Position
1369699..1370511
Genome browser
AA seq
270 aa
AA seq
DB search
MKKMILIAGPCVIENKDLVFKVAQNLQEFNENENIEFYFKSSFDKANRTSINSFRGPGLE
EGLKVLQSVKNEFGMKILTDIHESTQAAPVSEVVDVLQIPAFLCRQTDLLVAAAKTKAKV
NIKKGQFLNPSDIKYSVKKVLQTRGIEEEGYEVADKNGIFVAERGASFGYGNLVVDMRSL
VIMREFAPVIFDATHSVQMPGAAGGSSGGKSEFVEPLARAAAAVGVDGFFFETHTNPCEA
LCDGPNMLDLNRLKACVKTLLEIQNIIEGK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatgatactcattgccggtccttgcgtcattgaaaataaggatttggttttt
aaagtagcacagaatttacaagaatttaatgaaaatgaaaatatagaattttattttaaa
tcaagctttgacaaagcaaatcgtacaagtattaattcttttagaggccctggtcttgaa
gaaggattgaaagttttacaaagtgtaaaaaatgaattcggtatgaaaatcttaactgac
atacacgaaagcacgcaagcagcacccgtaagcgaggtggttgatgttttacaaattcct
gcttttttatgcagacaaactgatctgctagtcgcagcagccaaaacaaaggcgaaagta
aatattaaaaaagggcaatttcttaacccaagcgatattaaatacagtgtcaaaaaagta
cttcaaacacgcggtatagaagaagaaggctatgaagtagctgataaaaatggtattttt
gtagctgaaagaggagctagctttggctatggaaatttagtcgtggatatgagatctttg
gttatcatgcgtgaatttgctcctgttatatttgacgctactcatagtgtgcaaatgcca
ggggctgcagggggaagtagtggaggaaaaagcgaatttgtagagcctttagcaagagca
gcagcagctgtaggagtagatggctttttctttgaaacacatactaatccttgcgaagct
ttatgcgatgggcctaatatgcttgatcttaatcgtcttaaagcttgtgtaaaaacactt
ttagaaattcaaaatatcattgaaggaaaataa
DBGET
integrated database retrieval system