Cronobacter condimenti: AFK62_06110
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Entry
AFK62_06110 CDS
T04060
Name
(GenBank) endonuclease VIII
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
ccon
Cronobacter condimenti
Pathway
ccon03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFK62_06110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccon03400
]
AFK62_06110
Enzymes [BR:
ccon01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AFK62_06110
DNA repair and recombination proteins [BR:
ccon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AFK62_06110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ALB62099
UniProt:
K7ZZB1
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All DBs
Position
1334596..1335387
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AA seq
263 aa
AA seq
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MPEGPEIRRAADTLEEAVAGKPLTHVWFAFPELKPFEAVLLGERVERFETRGKALLTHFT
GGLTLYSHNQLYGVWRVVKAGETPQTTRSLRVRLETEEAAVLLYSASEIEMLDESGVAAH
PFLQRVGPDVLDMSLTVDQVKERLLSPRFHRRQFSGLLLDQAFLAGLGNYLRVEILWQAK
LAPRHKAAELNETQLDALARACLDIPRLSYQTRGRVDENKHHGALFRFEVFHRAGKKCRR
CGDIIEKTTLSSRPFYWCPGCQE
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgccggaaggaccggagatccgccgcgcggcggacacgcttgaagaggcggtagcgggc
aaaccgctgacccacgtctggtttgcttttcctgaattaaaaccctttgaggcggtattg
ctgggcgagcgggtcgagcgcttcgaaacccggggcaaagcgctgctgacgcattttacc
gggggacttacgctctacagccataaccagttgtatggcgtctggcgtgtggtgaaggcg
ggcgaaacgccgcagaccacgcgaagcctgcgtgtgcggctggaaacggaagaggccgcc
gtgctgctctacagcgcctcggagatagaaatgctggacgaaagcggcgtggcggcgcac
ccctttttacagcgcgtcgggcctgacgtgctggatatgtcgctgaccgtggatcaggtg
aaagaacgcttgttaagcccgcggtttcatcgccgacaatttagcggcttgctgctggat
caggcgtttctcgccgggcttgggaattacctgcgggtggagatcctctggcaggcaaag
cttgcgccgcgccataaagccgctgaactcaatgagacacagctcgacgcgctggcccgc
gcctgccttgatattccacggctttcttaccagacgcgcggcagagtggatgagaataaa
caccacggcgcgctgtttcgcttcgaggtgtttcaccgcgccgggaaaaaatgccgacgc
tgtggcgacattattgagaagaccacgctctcgtcgcggccgttttactggtgtccgggg
tgtcaggaatag
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