Chondrus crispus (carragheen): CHC_T00003584001
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Entry
CHC_T00003584001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K13345
peroxin-12
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CHC_T00003584001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccp04121
]
CHC_T00003584001
Ubiquitin system [BR:
ccp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
CHC_T00003584001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
17322700
NCBI-ProteinID:
XP_005714984
UniProt:
R7QCH6
LinkDB
All DBs
AA seq
437 aa
AA seq
DB search
MKGSRTVPARACQSTQEVLRSSHPFYRRNIFVSRNPSSIMSDTEPYRPGFFELYTAQHLS
AALRPALRFVLEVLSVRYPRLVRLASRSDEIFTSLLLVLETSQLRKDSALLSESFYSLRR
TAAVSFQANDLKFAPLSRKHIVLSVFFSVVIPHFKSKLDMWYSNATGGAAAELFDSHIGS
VGPVLDNDDNASQPPSVSNASLLLHNPSSRLAFLKVYMRELQRRYEAVRNFVMGPAFRRL
ALKWYPRITSVGESINLAYNFMYLFGHTNHFSFPLALQGLVLRRLSAGELLLDMSRSSAV
SSPGATGISLSNVASAASERILGIFKTGFFASIFAFRFLQYYYAAEASMPRESGPIIPPP
QPLMPAPGIDRKTALTPGMCPICHKPRNSPTACATSGYVFCYLCIVQQVQQTQKCPITLA
PTLIEDLVRVYDDAGAG
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtagtcgtactgtaccggcacgagcctgccaatccacgcaagaggtgttacgt
tcttcgcaccccttttacaggcgtaacatattcgtctcgagaaatccgagtagcatcatg
agcgacaccgaaccataccgccctggtttcttcgagttgtacaccgcacagcacttgagc
gccgcattgaggcctgcgcttcgcttcgtcttggaggtgctatccgtgcggtatccgaga
ttagttcgtcttgcatctcggtctgatgaaatctttactagtctactgctcgttctcgag
acatcccagcttcgaaaggattcagcattgctttcggaatccttctattcattgcggaga
acagcagctgtgtcctttcaagccaacgaccttaagttcgctccattgtccagaaagcac
atcgttctgagtgttttcttctctgtggtgataccgcatttcaagtcaaagctggatatg
tggtactccaacgcaacgggaggcgctgctgcggagcttttcgattcgcacataggttcc
gttggccctgttcttgataacgatgacaacgcaagccagcccccatccgtatcaaacgct
agtctgctattgcataatccatccagtcggttggcgtttctcaaggtttatatgagggag
ctgcaacgaaggtatgaagcagtcagaaattttgtaatggggccggcgtttcggagactt
gccttgaaatggtatccccgaattacttctgttggagaaagtatcaacctggcatataat
tttatgtatctgtttggtcacacgaatcacttttccttcccccttgccttgcagggatta
gtattgcgtcgattgagtgcgggcgagctattgctagacatgtccaggtcttctgctgtc
tcttctcctggagccacaggtatttcgttgtcgaacgtagcatctgcagcttccgaacgt
attctgggtatattcaagacaggcttttttgcaagcatctttgcatttcgctttttgcaa
tattactacgcggcagaggcttcaatgcctcgagagtccggcccaataattccgccgcca
caaccactaatgccagcgcctgggatcgaccgcaagacggcgttaacacctggaatgtgt
ccgatatgccacaagccacgaaacagtccgactgcatgtgctacatctggatatgtgttt
tgctatctttgcatcgtccagcaagtgcaacaaacacagaagtgcccaatcacactagcc
ccaacgttaatcgaagaccttgtgcgcgtgtacgatgacgcaggtgctggataa
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