Caulobacter vibrioides CB15: CC_0502
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Entry
CC_0502 CDS
T00049
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ccr
Caulobacter vibrioides CB15
Pathway
ccr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CC_0502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccr03021
]
CC_0502
03400 DNA repair and recombination proteins [BR:
ccr03400
]
CC_0502
Enzymes [BR:
ccr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CC_0502
Transcription machinery [BR:
ccr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CC_0502
DNA repair and recombination proteins [BR:
ccr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CC_0502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
AAK22489
UniProt:
Q9AAU2
LinkDB
All DBs
Position
521801..525871
Genome browser
AA seq
1356 aa
AA seq
DB search
MAQSFTGKKRIRKSFGRIPEAVQMPNLIEVQRSSYEQFLQRETRPGLRRDEGVEAVFKSV
FPIKDFNERAVLEYVSYEFEEPKYDVEECIQRDMTFAAPLKVKLRLIVFETEEETGARSV
KDIKEQDVYMGDIPLMTDKGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHASGKLLFAA
RVIPYRGSWLDFEFDAKDIVYVRIDRRRKLPATTFLYALGMDGEEILTTFYDVVPFEKRS
GGWATPYKPERWRGVKPEFPLVDADTGEEVAPAGTKITARQAKKFADGGLKTLLLAPEAL
TGRYLARDAVNMATGEIYAEAGDELDVTSIQALADQGFSTIDVLDIDHVTVGAYMRNTLR
VDKNAIREDALFDIYRVMRPGEPPTVEAAEAMFKSLFFDAERYDLSSVGRVKMNMRLEQD
VSDEVRILRKEDVLAVLKVLVGLRDGRGEIDDIDNLGNRRVRSVGELLENQYRVGLLRME
RAIKERMSSVDIDTVMPHDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
LGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATHARVNKYGFIESPYR
RVKDGKPQDEVVYMSAMEESKHVIAQSNIKVAEGEIVEDLVPGRINGEPTLLQKETVDLM
DVSPRQVVSVAAALIPFLENDDANRALMGSNMQRQAVPLVQSDAPLVGTGMEAVVARDSG
AVVIAKRTGVVEQIDGTRIVIRATEETDPARSGVDIYRMSKFQRSNQSTCINQRPLVKVG
DRIVAGDIIADGPSTELGELALGRNALVAFMPWNGYNFEDSILISERIVRDDVFTSIHIE
EFEVMARDTKLGPEEITRDIPNVGEEALRNLDEAGIVAIGAEVQPGDILVGKVTPKGESP
MTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVDVRVFNRHGVDKDERALAIERAEID
RLGKDRDDEFAILNRNISGRLKELLIGKVALSGPKGLSRGEITAEGLAQVASGLWWQIAL
EDEKAMGELESLRRLFDENRKRLDRRFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQP
GDKMAGRHGNKGVISRILPIEDMPFLADGTHVDVVLNPLGVPSRMNVGQIFETHLGWACA
NLGKQITNLLEDWQQGGQKQALVERLTEIYGPDEELPDTEEGLVELARNLGKGVPIATPV
FDGARMDDIEGHLEMAGVNKSGQSILFDGLTGEQFKRPVTVGYIYMLKLHHLVDDKIHAR
SIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYE
SIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELENS
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaatccttcaccggcaagaagcggatccggaagtcgttcggccgcattcccgag
gctgtgcagatgccgaacctcatcgaggttcagcgctcctcctacgagcagttccttcag
cgcgagacccgtccgggcctgcgccgcgatgaaggcgtcgaggcggtcttcaagtcggtg
ttcccgatcaaggacttcaacgagcgcgccgtgctcgagtacgtctcgtacgagttcgaa
gagcccaagtacgacgttgaagagtgcattcagcgcgacatgaccttcgccgcgccgctg
aaggtcaagctgcgcctgatcgtgttcgaaaccgaagaagaaaccggcgcccgctcggtc
aaggacatcaaggagcaggacgtctatatgggcgacatcccgctcatgacggacaagggc
accttcatcgtcaacggcaccgagcgcgtcatcgtctcgcagatgcaccgctcgcccggc
gtgttcttcgaccacgacaagggcaagacccacgcctcgggcaagctcctgttcgccgcc
cgcgtgatcccgtaccgcggctcgtggctggacttcgagttcgacgccaaggacatcgtc
tacgtccgtatcgaccgccgccgtaagctgccggccacgaccttcctctatgccctgggc
atggacggcgaagagatcctgaccacgttctacgacgtcgttccgttcgaaaagcgttcg
ggcggctgggccaccccgtacaagcccgagcgctggcgcggcgtgaagccggagttcccg
ctggtcgacgccgacaccggcgaggaagtcgctccggccggcaccaagatcacggctcgt
caagccaagaagttcgccgatggcggtctgaagaccctgctgctggcgcccgaagccctg
accggccgctatctggcccgtgacgccgtcaatatggcgaccggcgagatctacgccgaa
gccggcgacgagctggacgtgacctcgatccaggccctggccgatcaaggcttctcgacc
atcgacgttctggacatcgaccacgtcacggtcggcgcctacatgcgcaacaccctgcgc
gtggacaagaacgccatccgcgaggacgcgctgttcgacatctaccgcgtcatgcgtccg
ggcgagccgccgacggtggaagccgccgaggcgatgttcaagtcgctgttcttcgacgcc
gagcgctacgacctgtcgtcggtgggccgcgtgaagatgaacatgcgcctggagcaggac
gtctcggacgaagtccgcatcctgcgcaaggaagacgtcctggccgtgctgaaggtcctg
gtgggcctgcgcgatggtcgcggcgaaatcgacgacatcgacaacctgggcaaccgccgc
gtccgctcggtcggtgagctgctggaaaaccagtaccgcgtcggcctgctgcgcatggaa
cgcgccatcaaggaacgcatgtcgtccgtcgacatcgacaccgtgatgccgcacgacctg
atcaacgcgaagcccgctgcggccgctgttcgtgaattcttcggctcctcgcagctgtcg
cagttcatggaccagacgaacccgctgtcggaaatcacccacaagcgtcgtctctcggcc
ctcggcccgggcggtctgacccgcgagcgcgccggcttcgaagtccgcgacgttcacccg
acccactacggccggatctgcccgattgaaacgccggaaggcccgaacatcggtctgatc
aacagcctggcgacgcacgcccgcgtgaacaagtacggcttcatcgaaagcccgtaccgt
cgcgtgaaggacggcaagccgcaggacgaagtcgtctacatgtcggcgatggaggaatcc
aagcacgtcatcgcccagtccaacatcaaggtggctgaaggcgagatcgtcgaagacctg
gttccgggccgcatcaacggcgaaccgaccctcctgcaaaaggagacggtggacctgatg
gacgtgtcgccgcgccaggtcgtgtcggtggccgccgccctgatcccgttcctggaaaac
gatgacgccaaccgcgccctcatgggctcgaacatgcaacgtcaggccgtgcctctggtg
cagtcggacgccccgctggtcggcactggcatggaagccgtcgtcgcccgtgactcgggc
gccgtcgtgatcgccaagcgcaccggcgtggtcgagcagatcgacggcacgcgtatcgtc
atccgcgccacggaagagaccgaccccgcgcgttcgggcgtcgacatctaccgcatgtcg
aagttccagcgctcgaaccagtcgacctgcatcaaccagcgtccgctggtgaaggtgggc
gaccggatcgtcgccggcgacatcatcgccgacggtccgtcgaccgagctgggcgaactg
gccctgggccgcaacgcgctcgtcgcgttcatgccctggaacggctacaacttcgaagac
tcgatcctgatctccgaacgcatcgtccgtgacgacgtcttcacctcgatccacatcgag
gaattcgaagtcatggcccgcgacacgaagctgggtccggaagaaatcacccgcgacatc
ccgaacgtcggcgaggaagccctgcgcaacctcgacgaagccggcatcgtggcgatcggc
gccgaagtccagccgggcgacatcctggtcggcaaggtgacgccgaagggcgagagcccg
atgacgccggaagaaaagctgctgcgcgccatcttcggtgaaaaggcttcggacgtccgc
gacacgtccttgcgtctgcccccgggcgtcgccggcacgatcgtcgacgtgcgcgtcttc
aaccgtcacggcgtcgacaaggacgagcgcgcgctcgccatcgaacgcgccgagatcgac
cgcctgggcaaggaccgcgacgacgagttcgcgatcctgaaccgcaacatctcgggccgt
ctgaaggaactgctgatcggcaaggtcgcgctgtcgggccccaagggcctgtcgcgcggc
gagatcacggccgaaggcctggctcaggtcgcttcgggcctgtggtggcagatcgccctg
gaagacgaaaaggcgatgggtgagctggaaagcctgcgccgcctgttcgacgagaaccgc
aagcgcctcgaccgtcgtttcgaagacaaggtcgacaagctgcagcgcggcgacgaactg
cctccgggcgtcatgaagatggtcaaggtcttcgtggccgtgaagcgcaagctgcagccg
ggcgacaagatggccggccgtcacggcaacaagggcgtcatctcgcgcatcctgccgatc
gaggacatgccgttcctcgccgacggcacgcacgtcgacgtcgttctgaacccgctgggc
gtgccttcgcgcatgaacgtcggtcagatcttcgaaacccacctgggctgggcctgcgcc
aacctcggcaagcagatcaccaacctgctggaagactggcagcaaggcggtcagaagcag
gccctggtcgagcgtctgaccgagatctacggcccggacgaagagctgccggacaccgaa
gagggtctggtcgaactggcccgcaacctgggcaagggcgttccgatcgccaccccggtg
ttcgacggcgcgcgcatggacgacatcgagggccacctcgaaatggccggcgtcaacaag
tcgggccagtcgatcctgttcgacggtctgaccggcgagcagttcaagcgtccggtcacg
gtcggctacatctacatgctgaagctgcaccacctggtcgacgacaagatccacgcccgt
tcgatcggtccgtactcgctcgtcacgcaacagccgctgggtggtaaggcccagttcggc
ggtcagcgcttcggggaaatggaagtgtgggctctggaagcctacggcgcggcctacacc
ctgcaggaaatgctgacggtgaagtccgacgacgtggccggccggaccaaggtctacgag
tcgatcgtccgcggcgacgacacgttcgaagccggtatcccggaaagcttcaacgtgctg
gtcaaggaaatgcgctcgctcggcctgaacgtcgagctggagaacagctga
DBGET
integrated database retrieval system
