Colias croceus (clouded yellow): 123695947
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Entry
123695947 CDS
T08651
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03013
Nucleocytoplasmic transport
ccrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123695947
09122 Translation
03013 Nucleocytoplasmic transport
123695947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrc03019
]
123695947
03041 Spliceosome [BR:
ccrc03041
]
123695947
Messenger RNA biogenesis [BR:
ccrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
123695947
Spliceosome [BR:
ccrc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123695947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
Speriolin_N
Motif
Other DBs
NCBI-GeneID:
123695947
NCBI-ProteinID:
XP_045497851
LinkDB
All DBs
Position
12:complement(7038796..7041635)
Genome browser
AA seq
690 aa
AA seq
DB search
MGKEDTTTKKRRKLNTSSSNESSKQSPVDLYKKVVEFEESEAKLRPAEKDATLFMKICQD
VRQLFTDIAELKAKGTEEAKEKINAKRIEASLHLVALKKLNRLEKVRTRAGRDALHKEKQ
RVDSTQLLLQNLLYEADHLNKEVTKCLQFKSKDEEIELVPVEDFYKNAPTEITRPEITKK
DEHQLQLARLEWELRQRRELAGACNELIASKERVAAAIAAARSRLDALAPHLRDVLKSTK
PLQECLALRLDEKREETKLASLLPSPLFLLYTNASAYSDALGVKNISVVISGDEDEARRL
EQISHVENELVVSNDSDSDQDANDEDQQEKKKRHHRSTKVSKEEKAEAKKKEALKKHPLN
VSLSVKIPDGTALNLAFSYLMHLKIIVVKFYLDHSKPIAGVSAADVLDGDCVLNELYTGD
TGNDSPHPATAYVLKAAGIADAFQHFIPEVGRPYIWAQRMCGLDFMTAIGDEQKDLKNFQ
LCPSLSVATVENFIFTLQKRLKARVELMKELQDLESGKIMPSKETSTIRLSGSLTQWQSV
SWSEYSQAPSTAFLISEGLVTPDNMLYRAIITRQSAKLVALVALSSDYPKKAPLFSLTLH
YNGTHHNATNDDIRDIERVVNTDWQSGNILSRHSLSHQIQQLLICLDILLESMGTSEFPP
DKVMMQPVRGRNRMKPYKYVKQGTGIFVQF
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagaagacactactacgaagaaacgtcgcaaattaaatacaagttctagtaac
gagagctctaaacaaagccccgtggatttgtacaagaaagtagtagaattcgaagaatct
gaggctaaattgaggcccgcagaaaaagatgcaacgttatttatgaaaatttgccaagat
gttcgtcaactttttacagatatagcagagttaaaagccaaaggcacagaagaggctaag
gaaaaaataaatgcaaagagaatagaggcgtcattacatttggttgcattaaaaaaatta
aatcgtttagaaaaggtgcgaaccagggcaggacgggacgcactccacaaggagaagcag
agagtagactcaactcaattgcttttgcaaaatttattgtatgaagctgatcacttaaat
aaggaagttacaaaatgtttgcaatttaaatcaaaagatgaagaaattgaactggtgcct
gttgaagatttttataaaaatgctccaacagaaattacgcgtccagaaattaccaaaaaa
gatgaacaccaacttcagctagccaggttggaatgggagcttcggcagcgtagagagcta
gcgggagcatgcaatgaacttattgcttccaaggaaagagtggcggcggctatagcagct
gcaaggtcccggctagatgccttagcaccacatcttagagatgttctaaaatcaactaag
cctctgcaggagtgcttggcattgagactagatgaaaaaagagaagaaactaaattggca
tctttacttccctcacctctatttcttctttatacaaatgccagtgcatattctgatgca
ttgggtgttaaaaacataagcgtagttatatctggagatgaagatgaagctagaaggcta
gaacaaataagccatgtagaaaatgaactggttgtttccaatgattcagattcagatcaa
gatgctaatgatgaggatcagcaggaaaaaaagaaacgccatcatagatcaacaaaagta
tcaaaagaggagaaggcagaagcaaaaaagaaagaagctctgaaaaaacaccccttaaat
gtttctctatcggttaaaatccctgatggaactgctttaaacttggctttttcctatctt
atgcatttaaaaatcattgtggtcaagttttatttagatcattcaaagccaattgccgga
gtttctgctgctgatgtcctggatggagactgtgttctcaatgagttgtacactggagat
acaggaaatgactctccacatccggccactgcttatgtacttaaagcagctggtattgca
gatgcttttcaacactttattcctgaagtgggtaggccttacatatgggcccaaagaatg
tgtggattagattttatgactgcaataggagacgaacagaaagatcttaaaaatttccaa
ttatgtcctagtttaagtgtggctacagttgaaaattttatttttactttacaaaaaaga
ttaaaagcaagagttgaactaatgaaagagttgcaagatcttgagtctggtaaaatcatg
ccatctaaagaaacttctactattaggttgtcagggtctttgacacagtggcaatcagtc
agttggtcagaatatagtcaagctccatcaacagcatttttaatatcagaaggtttagtt
actccagataacatgttgtatcgtgcaatcattactcgccagtctgcaaaattagtggct
ttagtggccctaagcagtgattacccaaagaaagcgcctcttttctcattaactctacat
tacaatggaactcatcacaatgctactaacgatgatattagagatattgagagagttgtc
aatacagattggcagagtgggaatattttatctcgtcatagtctttcacaccaaattcaa
caattattaatatgtcttgatattttgttagaatcaatgggtacatctgaatttccacct
gataaagtcatgatgcaacctgtgaggggcagaaacaggatgaaaccttataaatacgta
aaacaaggaacaggtatttttgtacagttttga
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