Colias croceus (clouded yellow): 123698530
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Entry
123698530 CDS
T08651
Name
(RefSeq) polyubiquitin-C-like isoform X1
KO
K08770
ubiquitin C
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc04120
Ubiquitin mediated proteolysis
ccrc04137
Mitophagy - animal
ccrc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123698530
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123698530
04137 Mitophagy - animal
123698530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccrc04121
]
123698530
Ubiquitin system [BR:
ccrc04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
123698530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
123698530
NCBI-ProteinID:
XP_045501140
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Position
16:complement(6328268..6332174)
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AA seq
1141 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD
KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
N
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttttgtgaaaactcttacgggtaaaactattaccttggaagtagagccgtca
gacaccatcgaaaatgtaaaagccaaaattcaagacaaagagggcattcctcccgaccag
cagaggcttatttttgctggaaagcaattggaagatggaagaaccctctccgattataac
attcaaaaagagtctacccttcacttagttttacgccttcgaggtggtatgcaaattttc
gtcaagacactcacgggtaaaacaatcactcttgaagtcgagccttctgacacaatcgaa
aacgtaaaagccaaaattcaagataaggaaggaatccctcctgatcaacagcgtcttatt
tttgcgggcaaacaattggaagatggtcgcacactctctgactacaatattcaaaaggaa
tctacattgcatttggtgctaagattacgtggtggaatgcaaatttttgtgaagaccttg
actgggaagaccattactttagaagtagagccctctgacacaattgaaaatgttaaagcc
aaaattcaggacaaagaaggaatccctcctgaccaacagcgattgatctttgctggtaaa
caacttgaagatggtcgtactctctccgactacaacattcaaaaggaatccactttacac
ttggttctgcgtctgagaggtggaatgcaaatatttgtaaagactttgactggaaagacc
atcaccttggaggttgagccttcggacacaattgagaatgtcaaagctaagatccaagac
aaagaaggcatccctcctgaccagcagcgattgatctttgctggcaaacaacttgaagat
ggtcgtactctctctgactacaacatacaaaaagaatccactctacacttggttctgcgt
ctgagaggtggtatgcaaatatttgtgaagaccttgactggaaagaccatcaccttggag
gttgagccttctgacacaattgagaatgtgaaggctaagattcaagataaggaaggcatc
cctcctgaccagcagcgattgatttttgctggtaaacaacttgaagatggtcgcactctt
tcggactataatatccaaaaggaatcaacccttcacttggtcctgcgtctgagaggtgga
atgcagatatttgtgaagactttgactggaaagaccatcaccttggaggttgagccatct
gatacaattgagaatgtgaaggccaagattcaagataaggaaggcatccctcctgaccag
cagcgattgatctttgctggcaaacaacttgaagatggtcgtactctctctgactacaac
attcaaaaggaatccactctacacttggttctgcgtctaagaggtggaatgcagatattt
gtcaagactttgactggaaagaccatcacattagaggttgagccgtcagacactatcgag
aatgtcaaagctaagatccaagacaaagaaggcatccctcctgaccagcagcgattgatc
tttgctggcaaacaacttgaagatggtcgtactctctctgactacaacatacaaaaggaa
tccactctacacttggttttgcgtctgagaggtggtatgcaaatatttgtgaagaccttg
actggaaagaccattaccttggaggttgagccttctgacacaattgagaatgtgaaggcc
aagattcaagataaggaaggcatccctcctgaccagcagcgattgatctttgctggcaaa
caacttgaagatggtcgtactctctctgactacaacatacaaaaagaatccactctacac
ttggttctgcgtctgagaggtggtatgcaaatatttgtgaagactttgactggaaagacc
atcaccttggaggttgagccttctgacacaattgagaatgtgaaggctaagattcaagat
aaggaaggcatccctcctgaccagcagcgattgatttttgctggtaaacaacttgaagat
ggtcgcactctttcggactataatatccaaaaggaatcaacccttcacttggtcctgcgt
ctgagaggtggaatgcagatatttgtgaagactttgactggaaagaccatcaccttggag
gttgagccttctgacacaattgagaatgtgaaggccaagattcaagataaggaaggcatc
cctcctgaccagcagcgattgatctttgctggcaaacaacttgaagatggtcgtactctc
tctgactacaacattcaaaaggaatccactctacacttggttctgcgtctaagaggtgga
atgcagatatttgtgaagactttgactggaaagaccatcacattagaggttgagccttca
gacactatcgagaatgtcaaagctaagattcaagacaaagaaggcatccctccagaccag
cagcgtttgatatttgctggaaagcaacttgaagatggtcgcactctttcggactataat
atccaaaaggaatcaacccttcacttggtcctgcgtctacgaggtggtatgcaaatcttt
gtaaagacattgactggaaagaccattactttagaagtagagccctctgacacaattgaa
aatgttaaagcaaaaattcaggacaaagaaggaatccctcctgatcaacagcgtcttatc
tttgctggtaaacaacttgaagatggtcgtactctctccgactacaacattcaaaaggaa
tccactctacacttggtcctgcgtctgagaggtggaatgcaaatatttgtgaagactttg
actggaaagaccatcaccttggaggttgagccttctgacacaattgaaaacgtaaaagcc
aaaattcaagataaggaaggaattcctcctgaccaacagcgacttatctttgctggtaaa
caacttgaagatggtcgcactctttcggactataatatccaaaaggaatcaacccttcac
ttggtcctgcgtctgagaggtggaatgcagatatttgtgaagactttgactggaaagacc
atcaccttggaggttgagccatctgatacaattgagaatgtgaaggccaagattcaagat
aaggaaggcatccctcctgaccagcagcgattgatctttgctggcaaacaactcgaagat
ggtcgtactctctccgactacaacattcaaaaggaatccactctacacttggttctgcgt
ctgagaggtggtatgcaaatatttgtgaagaccttgactggaaagaccatcacattagag
gttgagccttctgacacaattgagaatgtcaaagctaagatccaagacaaggaaggcatc
cctccagaccagcagcgtttgatatttgctggtaagcaacttgaagatggacgtactctt
tctgattacaacatccaaaaggagtctactcttcacttggttctccgtctccgtggtgga
aattaa
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