Chlamydia crocodili: H9Q19_00660
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Entry
H9Q19_00660 CDS
T08674
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ccrd
Chlamydia crocodili
Pathway
ccrd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccrd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H9Q19_00660 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrd03021
]
H9Q19_00660 (rpoB)
03400 DNA repair and recombination proteins [BR:
ccrd03400
]
H9Q19_00660 (rpoB)
Enzymes [BR:
ccrd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H9Q19_00660 (rpoB)
Transcription machinery [BR:
ccrd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H9Q19_00660 (rpoB)
DNA repair and recombination proteins [BR:
ccrd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H9Q19_00660 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QVE49211
UniProt:
A0ABX8CGU4
LinkDB
All DBs
Position
complement(154056..157814)
Genome browser
AA seq
1252 aa
AA seq
DB search
MFKCPERVSVKKKEDILDLPNLIEIQIKSYKQFLQIGKLAEERDNVGLEEVFREIFPIKS
YNEATILEYLSYNLGVPKYSPDECIRRGITYSVTLKVRFRLTDETGIKEEEVYMGTIPIM
TDKGTFIINGAERVVVSQVHRSPGINFEQEKHSKGNILFSFRIIPYRGSWLEAIFDINDL
IYIHIDRKKRRRKILAMTFIRALGYSSDADIIEEFFKIEERSLKSEKDFTLLVGKILADN
VLDEASSLVYGKAGEKLSTAMLKRMLDADISTLKIAVEADENHPIIKMLAKDPTDSYEAA
LKDFYRRLRPGEPATLANARSTIMRLFFDSKRYNLGRVGRYKLNRKLGFPMDDESLSQVT
LRKEDVIGALKYLIRLKMGDEKASIDDIDHLANRRVRSVGELIQNQCRSGLARMEKIVRE
RMNLFDFSSDTLIPGKIISAKGLASVLKDFFGRSQLSQFMDQTNPVAELTHKRRLSALGP
GGLNRERAGFEVRDVHASHYGRICPIETPEGPNIGLITSLSSFAKINEFGFIETPYRIVR
DGVVTDEIEYMTADVEEECVIAQASATLDEYNMFVDPVCWARCRGEAFEADTSTVTHMDV
SPKQLVSIVTGLIPFLEHDDANRALMGSNMQRQAVPLLKTEAPIVGTGLESRAAKDSGAI
VVAEEDGIVDYVDGYKIVIAAKHNPTLKRTYDLKKFLRSNSGTCINQRPLCSVGDVVVKG
DVIADGPATDQGELALGKNILVAFMPWYGYNFEDAIIISEKLIKQDAYTSIYIEEFELTA
RDTKLGKEEITRDIPNVSEEVLANLGEDGIIRIGAEVKPGDILVGKITPKSETELAPEER
LLRAIFGEKAADVKDASLTVPPGTEGVVMDVKVFSRKDRLSKSDDELVEEAVHLKDLQKG
YKNQISVLKTEYREKLGALLLNEKAPASIIHRRTADILVQEGTVFDQETIELLEQETLVD
LLMPPCEMYDVLKGLLSDYETSLQRLEVNYKTEVEHIREGDADLDHGVIRQVKVYVASKR
KLQVGDKMAGRHGNKGVVSKIVPEADMPYLANGETVQMILNPLGVPSRMNLGQVLETHLG
YAAKTAGIHVKTPVFEGFPESRIWDMMIEQGLPADGKSYLYDGKTGERFDNTVVIGYIYM
LKLSHLIADKIHARSIGPYSLVTQQPLGGKAQMGGQRFGEMEVWALEAYGVAHMLQEILT
VKSDDVSGRTRIYESIVKGENLLKSGTPESFNVLIKEMQGLGLDVRPMVVDA
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaatgcccggagcgggttagcgtcaaaaaaaaggaagatatcttagatcttcca
aatcttattgaaattcaaattaagtcctacaagcaatttcttcagattgggaagcttgca
gaagagcgcgataatgtcggcctggaagaagttttcagagagatttttccaattaaatct
tataatgaagctactatcttagagtatctgtcttataacttaggtgtgccgaagtactcc
cctgatgagtgtattcgtagaggaatcacctatagcgtaactctaaaagttcgttttcgt
ttgactgatgaaacaggaatcaaagaagaagaagtctatatgggaactatacccatcatg
acagataaaggtacctttattattaacggtgctgaaagagtcgttgtttctcaggtacac
agatctccgggaattaactttgaacaggaaaagcattctaaagggaatattttattttct
tttagaattattccttatcgaggtagttggttagaagctatttttgatatcaacgattta
atttatattcacattgatagaaaaaaacgtcgtcgcaagattttagctatgacatttatt
cgtgctttggggtattcatctgatgctgatattattgaagagtttttcaaaatagaggaa
cgttctttaaagagtgaaaaagattttactcttttagttggtaagattttagctgataat
gttcttgatgaggcctcctccttagtttacggaaaagctggtgaaaaacttagtacggca
atgttaaaacgcatgctggatgctgatatttcaactttaaaaatagctgtagaggcagat
gagaatcaccctatcatcaaaatgttggcaaaagatccgacagactcttatgaagctgct
ttaaaagatttttatcgaagattgcgtccaggtgaacctgcaacattagcgaatgccaga
tcgacaattatgcgtttattcttcgattctaagcgctataacttaggaagagtaggtcgt
tataagttgaatagaaagctcggattcccaatggacgatgagtctctatcacaagttacc
ctgagaaaagaagatgttattggtgctttgaagtatcttatccgtttaaaaatgggtgat
gaaaaagcttccatcgatgatattgaccatttagcgaatcgccgtgtacgttctgtcggg
gaattaattcaaaaccaatgtcgttcgggcttggctagaatggaaaaaattgttcgcgag
aggatgaatttatttgatttttcttccgacacattaattcctggaaagatcatctcagcc
aaaggtcttgcaagtgttttaaaagacttttttggtcgttctcaactttctcaatttatg
gatcaaactaatcctgtggcggaattgacgcataagcgtcgtttatcagctttgggtcct
ggaggtttaaatagggaaagagctggatttgaagttcgtgacgtgcatgcgagccactat
ggacgtatttgtccaattgagactccagaaggaccgaatattggtttgattacttcgctc
tcttcttttgcaaaaattaatgaatttggatttattgagaccccataccgcattgttaga
gatggtgttgttactgatgaaatcgaatacatgaccgctgatgttgaagaagaatgtgtg
atcgcgcaggcttcagcaactttagatgaatataatatgtttgtggatcctgtatgttgg
gcaaggtgccgcggagaggcttttgaagctgataccagtaccgttacccatatggacgtt
tccccaaaacaattggtatctattgttacaggtttgatcccatttttagaacatgatgac
gctaaccgtgctctcatgggatcaaatatgcaacgtcaagctgtgcctttgttaaaaaca
gaagctcctattgttggaacgggattggaatctcgtgctgctaaagattctggagctatt
gttgtcgctgaagaagatggaattgttgactatgttgacggttataagatagttattgct
gcgaaacacaatccaacattgaaacgtacttatgatcttaaaaagttcctaagatcgaat
tcaggtacatgcatcaatcaacgacctttatgtagtgttggagatgtggtagttaaaggt
gatgttatcgctgacggtcctgctacagatcaaggagaacttgctttaggaaagaatatc
ttggtagccttcatgccatggtatggatacaattttgaagatgcgattattatttctgaa
aagcttattaagcaagatgcctatacttcgatttatattgaagaattcgaactaacagct
agagatacaaaattaggaaaagaagagattactcgtgatattcctaatgtttccgaagaa
gttttagcaaatttaggtgaagacggaattattcggattggagctgaagtaaaaccaggc
gatattcttgttggtaaaatcactccaaaatcagaaacagaactcgctcctgaagaacgt
ttattacgagccatttttggtgagaaagctgctgatgttaaagatgcttctttgacggtg
cctccaggaacagaaggagtcgtcatggatgttaaggtcttcagtagaaaagatagactt
tctaaaagtgatgatgaacttgtggaagaagctgttcatttaaaagacctacagaagggt
tataagaatcaaatttcagtattgaagactgaatatcgtgagaaactcggagcgttatta
cttaatgaaaaagctccagcttctattattcatcgccgtacagcagatatcttggttcaa
gaaggtacggtatttgaccaagagactatagagcttcttgaacaagagactttagttgat
cttcttatgcctccttgtgaaatgtatgatgtcttaaaaggtctactttctgattatgag
acttccttacaacgtctggaagtcaattataaaacagaagttgagcatatccgtgaggga
gatgctgatcttgatcacggcgtcattcggcaggttaaagtttatgtagcttcaaaaaga
aaactccaagttggagataaaatggctggacgtcatggaaacaaaggagttgtttctaag
attgttcctgaggctgatatgccatatttagctaatggcgaaactgtacagatgatctta
aatcctcttggggtgccttcgaggatgaacttaggccaggtattggaaacacatcttggt
tatgctgcaaaaactgctggcattcatgtaaaaactccagtgtttgaaggattcccagag
tctcgtatttgggacatgatgatcgagcaaggattgcctgcagacggtaagtcttactta
tatgatggaaagacgggagagagattcgataatactgtagttattggctacatctatatg
ttgaaactcagccacttaatcgcggataaaattcacgctagatctattgggccttactct
ttagtaactcagcagcctcttgggggtaaagctcagatgggaggtcaaagatttggggag
atggaggtgtgggctttggaggcttatggggtagctcatatgcttcaagagattctcaca
gtaaaatctgacgacgtttctggacgaacaaggatttacgaatctattgttaaaggagaa
aatcttcttaaatcaggtacacctgagtcgtttaacgttttaattaaagaaatgcaaggt
ttaggacttgatgtccgtcctatggtagtagatgcttaa
DBGET
integrated database retrieval system
