Cariama cristata (Red-legged seriema): 104164905
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Entry
104164905 CDS
T08341
Symbol
COL9A3
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri04510
Focal adhesion
ccri04512
ECM-receptor interaction
ccri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104164905 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104164905 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104164905 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ccri00535
]
104164905 (COL9A3)
Proteoglycans [BR:
ccri00535
]
Extracellular matrix (ECM) proteoglycans
Others
104164905 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
104164905
NCBI-ProteinID:
XP_009702687
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All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search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NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggctggattctcctctcttgggcttctcttcctatgtcagctgttagccgccacatca
gctcagagagtaggaccacaaggcccccctggaccacgaggaccccctggaccatctggc
aaggacggcatagacggagagccaggccctcctggtttgccaggcccaccagggccaaaa
ggtgcaccagggaagcctggagcagctggcgaagccggattgcctggccttcctggagtg
gatggtttaacaggaactgatggcccacctggcccaaatgggcctccaggagaccgtggt
gcgttaggacctgccgggccacctggaccagctggcaaaggactaccaggacctccaggg
cctccaggacccagtgggctcccaggtggaaatggatttcggggtcctcctggacctttt
ggtctgccaggattcccagggcctcctggaccacctggacctcctggtcttccaggcacc
cttcctgatggtggtggggaccttcagtgcccagctctgtgcccaccgggtcctccaggt
cccccaggaatgccaggattcaagggacacactggtcacaaaggagaacctggtgaaata
ggaaaagaaggagagaagggtagccctggccctcccggtcctccaggaattcccggcagc
gttggcttgcagggcccaagaggactaagaggcctccctggtccaatgggtccagctggt
gacagaggtgacattggtttcagagggccacctggaatcccaggacctccagggaaagct
ggagcccaaggaaacaaaggacctcaaggattcagggggcccaaaggtgacactggtaga
cctggaccaaaaggaaacccaggggctcgtggactcataggagaacctggcatgcctggc
aaggatggacgggatggagctcctggactcgatggtgagaagggtgatgcagctcgtatg
ggtgctcctggagagaagggaccaaacggactgcccggactgcctggaagagcaggtatt
aaaggctcaaagggtgaacccggcagtcctggggagatgggagaggcaggtccctctgga
gagccaggcatccctggcgatgttggtattcctggtgagagaggtctgccgggacccaga
ggagcaactggaccacttggtcttcaaggcccaatgggagcccccggtgtcaggggtttc
cagggtcccaaaggggccagtggtgaacctggccttcctggtccaactggaattcgtgga
gagttaggtgacaggggtcctcctggtgttcctggtcccaaaggtaaccagggcattgct
ggagcagatggtctcccaggtgacaaaggagaactgggtccctttggtccccctggccaa
aaaggagagccaggaaaaagaggagaacttggtccaaaaggtgtccaaggacctaacggg
acagctggagtaccagggatcccaggacatccagggcccatgggccctcagggcnnnnnn
nnnnnnnnnnnnnnnnnnnnnnncattcctggcatcacgggaaaacctgggcctcctggc
aaagaggctagtgaacaacatataagagaagtctgtggggaaatgataaatgatcaaatt
gcccagttagctgctaatctgagaaagcccctgtctcctggaatgacgggtcgcccgggc
ccagctggtcctccaggtcctcctggagctatgggaagcgttgggcaccctggtcctcgt
ggtccccctggatacagagggccaacgggagaacttggggatcctggtcccagaggtgac
actggcgaaaagggagacaaaggacctgttggtcaaggcattgatgggcctgatggcgat
caaggacttcaaggaccacctggtgtacctggaattactaaaaatggtcgtgatggtgct
cagggtgaacctggtctcccaggggatcctggtactcctggtgcgattggggctcaggga
actccaggaatatgtgacacgtcggcttgcatgggagctgttggagcatcaacttccaaa
aaatcgtag
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