Chrysoperla carnea: 123295311
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Entry
123295311 CDS
T09255
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
ccrn
Chrysoperla carnea
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccrn03000
]
123295311
03036 Chromosome and associated proteins [BR:
ccrn03036
]
123295311
Transcription factors [BR:
ccrn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123295311
Chromosome and associated proteins [BR:
ccrn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
123295311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_15
zf-C2H2_11
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
zf-met
zf-C2H2_7th_ZNF462
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
123295311
NCBI-ProteinID:
XP_044732542
LinkDB
All DBs
Position
3:41609234..41618162
Genome browser
AA seq
710 aa
AA seq
DB search
MATEFDPIKIEGLDNENAENVTEIQSYLDTFNKEIQSTDGTTITQLTEVEKEDGDDDEGT
YFVDQAGHYYYQAKSSDPPVLEIRGSENGEEATEEGEKAPSDNEETETAEFLIQREEDDE
EEGTTIINESEANQMLINTGDAFQTVTIVPSENTPGEVSYVLIVQQQDDEENKINNSETD
GDQSNINVYDFDENEEGGMVDSDAEDDKSKIIKFVTPRKSQTVTQAHMCNYCNYTSPKRY
LLSRHMKSHSEERPHKCSVCERGFKTIASLQNHVNTHTGTKPHRCKYCESAFTTSGELVR
HVRYRHTHEKPHKCRECNYASVELSKLKRHIRCHTGERPYQCPHCTYASPDTFKLKRHLR
IHTGEKPYECDICAARFTQSNSLKAHKLIHNVANRPVFPCELCPTTCGRKTDLRIHVQKL
HTSDRPLKCKRCGKSFPDRYSYKLHNKTHEGEKCFKCDLCPYASISARHLESHMLIHTDQ
KPYQCDQCGQSFRQKQLLKRHQNLYHNPNYVPPAPREKTHECPECGRAFRHKGNLIRHMA
VHDPESSLQEKQLALKLGRQKKIQIIDGQQVEVMPGLDSDMDEDDTDVEVSAVEGADGQQ
YVVLEVIQFAEDEEGGENDGTLLEAGQILPDDGEYINEDVLAALQNQKVEKEEHEEDKKF
STEKDMENCFGFDEEENEQDEDDDIDEDKNKISILGSMEVDDDEEEEEET
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgaatttgatccaattaaaattgaaggattggataatgaaaatgcagaaaat
gtaactgaaattcaatcatatttggatacttttaataaagagattcaaagtacagatgga
acaactatcacacaattaacagaagtcgaaaaggaggatggagatgatgacgaaggtaca
tattttgtggatcaagctggacattattattaccaagcaaaatctagtgatccaccagtt
ttggaaatacgaggatcagaaaatggtgaagaagctacagaagaaggagagaaagctcct
tcggataatgaagaaactgaaacagctgaatttttaatacaacgagaagaggatgatgaa
gaagaagggacaacaattattaacgaatcagaagcaaatcaaatgttaatcaacactggt
gatgcatttcaaacagtaacaatagtaccatccgaaaatacgccaggtgaagtaagctat
gtgttaattgtacaacaacaagacgatgaagaaaacaaaataaacaacagtgaaacagat
ggggaccaatcaaatataaacgtttatgatttcgacgaaaacgaagaaggtggaatggtg
gattcagatgctgaagatgacaaatcaaaaattattaaatttgtcacaccaagaaaatca
caaacagtgacacaagcacatatgtgtaattattgtaattacacgagccctaaacgctat
ttattatcacgtcacatgaaaagccactcagaagagcggcctcacaaatgtagtgtctgc
gaacgtggttttaaaacaattgcatcattacaaaatcatgtaaatacacatactggaaca
aaaccacatcgttgtaaatattgtgaatctgcttttacaacgtctggtgaacttgtgcga
cacgtacgctatcgacacactcatgaaaaaccacataaatgtcgagaatgtaattacgca
tcagttgaattaagtaaattaaaacgtcacattcgatgtcatacgggagaaagaccgtat
caatgtccgcattgcacatacgctagtcctgatacattcaaattaaaacgtcatttacgg
atacatacgggtgaaaaaccatatgagtgtgatatctgtgcagctaggttcacacaatcg
aattcgttaaaagcacataagttaatacataatgttgctaatcgtccagtattcccttgt
gaactatgtccaacaacatgtggacgaaaaactgatttacgtatacatgtgcaaaaatta
catacttcggatcgtccgttaaaatgtaaacgatgtggaaaatcattccccgatcgttac
agctataaattacataataaaactcatgaaggtgaaaaatgttttaaatgtgacttgtgt
ccgtatgcctcaatatcggcccgacatttggaatcacatatgttaatacataccgatcag
aagccttatcaatgtgatcaatgtgggcagtcgtttagacaaaaacaattattaaaacga
catcagaatttgtatcataatcccaattatgtgccaccagcacctagagaaaaaactcat
gagtgtccggaatgtggacgagcatttagacataaaggaaatttaattagacatatggct
gtacatgatcctgaatcaagtttacaggagaaacaattagctttgaaattaggacgacaa
aagaaaatacaaattattgatggtcaacaagtggaagttatgcctggtcttgatagtgat
atggatgaagatgatacagatgttgaagtatccgctgttgaaggtgcagacggacaacag
tacgttgtattagaagttattcaatttgctgaagatgaagagggtggtgaaaatgatgga
actttactggaagctggtcaaattttacctgatgacggtgagtatataaatgaagacgtt
ttggcagcattacaaaatcaaaaagttgaaaaagaagaacatgaagaggataagaaattc
agcactgaaaaagacatggaaaactgttttggatttgatgaagaagaaaatgaacaagat
gaagacgatgacatagacgaagacaaaaacaaaatatcaattttaggttctatggaagtt
gatgacgatgaagaagaagaagaagaaacataa
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