Chrysoperla carnea: 123299184
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Entry
123299184 CDS
T09255
Name
(RefSeq) protein SMG8
KO
K18734
protein SMG8
Organism
ccrn
Chrysoperla carnea
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrn03019
]
123299184
Messenger RNA biogenesis [BR:
ccrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
123299184
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Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
zf-H2C2
Motif
Other DBs
NCBI-GeneID:
123299184
NCBI-ProteinID:
XP_044737406
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Position
1:complement(35084942..35093197)
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AA seq
865 aa
AA seq
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MKQDTFILPHSNIPSHSDKVLIVSIIGKTAYSSFSQKTKPLGRVFGGESETNSDSVIEGL
YDEPNQIIYLHLRGLFDTATLIKNYENLVERAKNACDENESDTYVPDFNIIYNQVKNAYA
RAMLLLFHISHIIVLSHPGSTFDLSYLQMFKAIENARQKSAMNVSDILKNIPNISSEWIA
NRRLCTPRLVFYFETCPKEIVKKGHASIKKLEHAIEDKVYHIFRKAKILINNSSNCLFAI
PPNQEYVYMNTEYDPTTDRLAYALRSLLQSCKQTNISSNQTTGINTGGIQLDFTYAVQTD
SSTVQEKRSFVKFLQVHTNHAFVKGFDDSLGRNTSRAHFEMPSVDIWFQVANQLYKLFCD
VNEETSVRGLSALNIDTRFSEQRCLKVLPLAVARYQENLPPHYTRSYHESRLAVAMTVFT
NHARGPMFEKYSKQLIEECAQHFENGRQLCEQPSLTGNPCTLPKHDNEKDHCSGVRYVAA
CDCGRSQGSREDPYNVRYANHTFYQKLMRDCNCNHLERIDFPVFQPSTKEYRAANLFSSL
STQYHRPARSVDMISSDRLSDISAESDLMVPSKSGLSPAHAHSEINDIELELIDDAEQKD
KNLVRQPSTTEYLPGMLTLSSPAGLLPQFPSWSLVCLGPSSLYSHNVGLTDPHHPGFLPF
SNFLLPWDVTVKSSHGKSPWPIVNENRKYNSNSVLSRSNQKKNKGNTAPSGSNNEVTVKV
FVGIEYECPRGHRFMMSSPDKVLRASSGIVKESGHKVTTSDMPLFFNCPCRPNKPLVAQL
MRVHVVTPKNLVFITLCPKVQPGIGAPVFIPSFEQSIKLTQSTYWILRLPYVYVADREPF
LPPLHAPTSQPPARLLQGMWGILNA
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagatacatttattttaccacacagtaatatcccaagccattcagataaagtt
ctaatcgtatcaataattggaaaaacagcatacagttcatttagccagaaaacgaaacct
ttgggtcgtgtatttggtggtgaatctgaaacgaatagcgattcggtaattgaaggtcta
tatgatgagccaaatcaaatcatttatctacatttacggggattattcgatacagcgaca
ctcattaaaaattatgaaaatttagttgaacgtgccaaaaatgcatgtgatgaaaatgaa
tcagacacatatgttcctgattttaatatcatttataaccaagtgaaaaacgcttatgcc
agagctatgcttttactttttcatatttctcatattatcgttctcagtcatccaggaagt
acatttgatttaagttacttacaaatgtttaaagctattgaaaatgctcgccaaaaatca
gcaatgaatgtttcagatattttaaaaaatattccaaatataagttctgaatggatcgct
aacagacggttgtgtacaccacgattggtattctattttgaaacatgccccaaagagatt
gttaaaaagggccatgcatcaataaagaaattggaacatgcaattgaagataaagtttat
catatattccggaaagcgaaaattcttataaataatagttcaaattgtttatttgcaata
ccaccaaatcaagagtatgtttacatgaataccgaatatgatccaactacagatcgttta
gcttacgcattacgcagtctcttgcaatcatgtaaacaaacaaatatttcctcaaatcaa
acaactggtataaataccggtggtattcaattagattttacgtatgctgtgcaaacagat
tcatcaacagtccaagaaaaacgatcatttgtaaaatttttacaagtgcacacaaatcac
gcatttgttaaagggttcgatgatagtcttggtcgaaatacgtcacgtgcacattttgaa
atgccatcagttgatatttggtttcaagttgcaaatcaattgtataaattattttgtgat
gttaacgaagaaacctcagttcgtggattatcggctttaaatattgatactagattttca
gaacaacgatgcctgaaagtgttaccgttagctgttgcacgatatcaagaaaatcttcca
ccacattataccagatcgtatcatgaaagtcggctagcagttgctatgacagtatttaca
aatcatgccagaggtccaatgtttgaaaaatatagcaagcaattaattgaagaatgtgca
caacattttgaaaatgggcgacaattatgtgaacaaccaagtctcacaggaaatccttgc
actttaccaaaacatgataatgaaaaagatcattgcagtggcgtacgctatgtggccgca
tgtgattgtgggcgctcacaaggatcacgtgaagatccatacaatgtacgctatgcaaat
cacaccttttatcagaagttgatgcgtgattgtaattgtaatcatttggaacgtattgat
tttcctgtatttcaaccatcaacaaaagaatatcgtgctgctaatttattttcaagtttg
tcaacacaatatcacagaccagcacgatcagttgatatgattagttcagatcgtttatcg
gacatttcagctgaaagtgatttaatggtaccatcaaaatcagggcttagcccagcacat
gctcattcagaaatcaatgatatcgaattagaattaattgatgatgctgaacagaaagat
aaaaatttggtacgacaaccaagtactacagaatatttaccaggcatgttaacgctatca
tctccagcgggactattaccacaatttccaagttggagtttagtttgtttaggtccaagt
tctctttatagtcataatgttggattaacagatccacatcaccctggctttttaccattt
tcaaattttttattaccttgggatgttactgtcaaatcatcacatggaaaatcaccatgg
ccgattgtaaatgaaaatcgaaaatataattccaatagtgtactttcacgatcgaatcaa
aagaaaaataaaggaaatacagcaccaagtggctctaataatgaagtcactgttaaagtt
tttgttggtattgagtatgaatgtcctagaggtcatagattcatgatgtcgtctccagat
aaagtgttacgtgcttcatctggcattgtaaaagaatctggacataaagttacaacatca
gatatgccattatttttcaattgcccgtgtcgtcccaataagccattggtcgctcaatta
atgcgtgttcatgtcgttacaccaaaaaatttagtttttattaccttatgtccaaaagtt
caaccaggcattggtgctccagtatttataccgagtttcgaacagtctattaaactaaca
caaagtacatattggattttgcgtttaccatatgtttatgttgcggatcgtgaaccattt
ttacctccgttacatgcaccaacatcacaacctcctgcaagattacttcaaggaatgtgg
ggaattctcaatgcctaa
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