Coprococcus catus: CC1_33340
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Entry
CC1_33340 CDS
T02584
Name
(GenBank) Superfamily I DNA and RNA helicases
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cct
Coprococcus catus
Pathway
cct03420
Nucleotide excision repair
cct03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CC1_33340
03430 Mismatch repair
CC1_33340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cct03400
]
CC1_33340
Enzymes [BR:
cct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CC1_33340
DNA repair and recombination proteins [BR:
cct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CC1_33340
MMR (mismatch excision repair)
Other MMR factors
CC1_33340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_11
AAA_30
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
CBK81869
UniProt:
D4JBZ8
LinkDB
All DBs
Position
3390103..3392103
Genome browser
AA seq
666 aa
AA seq
DB search
MELNKSQLQAVCHDKGPMMVLAGPGSGKTMVITHRVKWLIEHAGVHPAGILVVTFTKAAA
DEMRQRFVSLMDGRTMPVSFGTFHAIFFSVLKHAYNYTASNIIREEQKQQLIREIIEDMP
VEPDNVSEFVNDVLSEIGLVKGSMMDIEHYYATSCATSVFRDIYKQYVQRMENSRLIDFE
DMLVYTWELFTQRKDILAAWQHKFQYILIDEFQDINLLQYKLIRMLALPQNNIFIVGDDD
QSIYGFRGARPEIMLNFEKDFSDVKKVFLSVNYRSQAAIVRGAGCVIKNNKQRFDKQIRA
VRPEKEPVDIRVFQGPADENAAVIREIRDYHDQGILYHEMAVLFRTNTQARMLLEKMMEY
NIPFKMQDAMPNIYQHWVTQDIMAYIQIALGSTARSHYLRIINRPNRYVSRQMLSERQVA
FDVLMEQYKDKPWMQERLSKFAYDVHMLTQMQPFAAINYIRHGIGYDEFLEKYAEERKMD
GQDLIELLDELQDSARNYATYEEWFGHIEEYTEQLRKQTRKQRDEKADGVALATMHHSKG
LEYQIVFIVDANETVTPHHKALLDADIEEERRMFYVAMTRAKSRLHIFFLKERYGRPMVM
SRFVGEILVDRDAVKPGMRVQHQTYGAGVIKEVTDKAIVIRFDKIRQEKKLDIQFCLANQ
LLKIQS
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggagttaaataagtctcagcttcaggcagtctgccatgataaggggccgatgatggta
cttgccggaccgggttcgggcaagaccatggtcatcacccatcgtgtgaaatggttgatt
gagcatgccggtgtccatccggcgggcatactggttgtgacatttacaaaagctgccgca
gatgaaatgcggcagcgttttgtttctctgatggacggcaggacgatgcccgtgagtttc
ggcacttttcatgcgattttcttttcggtgctgaaacatgcctataactatacggcatct
aatatcattcgtgaggagcagaaacagcagctgatccgggagatcattgaagatatgcct
gtagaaccggataatgtcagtgagtttgtcaatgatgtgctcagtgagattgggcttgtt
aaaggcagcatgatggatattgagcattattatgccaccagctgtgcaacatccgtgttc
agagatatttataaacagtatgttcagaggatggagaacagccgtctgattgattttgag
gacatgttggtttatacttgggaactgtttacccagcgaaaggatatccttgcagcctgg
cagcataagtttcaatatatcctgatcgatgagtttcaggacattaacttgctgcagtac
aagctgatccggatgctggcattgccgcagaacaatatttttattgtgggggatgatgac
cagtctatttatggattcaggggtgcaaggcctgagatcatgctgaactttgagaaagat
ttctcggatgtgaagaaggttttcctttctgtcaattaccgcagtcaggcggctattgta
cgcggggcgggatgcgtgatcaagaataacaaacagcgttttgacaagcagatccgggcg
gtgcggcctgagaaagaaccggtggatatccgtgttttccagggaccggctgatgagaat
gcggcggttatccgtgaaatccgggattaccatgatcaggggattttgtatcatgagatg
gcggtgctgtttcgaaccaatacccaggccagaatgctgttggagaagatgatggagtat
aatattccattcaaaatgcaggatgccatgccgaatatctatcagcactgggtaacccag
gatattatggcttatatccagattgctctcggaagtacggcaagaagtcattatctgagg
attatcaaccggccgaaccgttatgtgagcagacagatgttgagtgagcgtcaggtggct
tttgatgtactgatggagcagtataaggataagccatggatgcaggagcgtttgtcgaag
tttgcttatgatgtgcatatgctgacgcagatgcagccctttgcagccattaattacata
cggcatgggattggatatgatgaattccttgagaagtatgccgaagaacggaagatggac
ggacaggatttaattgagctgttggatgaacttcaggatagtgccaggaattatgcaacg
tatgaggaatggtttggacatattgaagaatatacagaacaactgcgaaagcagaccaga
aaacagcgcgatgagaaggcggatggcgtggctctggcaacaatgcatcattccaaggga
ttggagtatcagattgtttttatcgtagatgccaatgagacagtgacgccgcatcataaa
gctcttctggatgcagatattgaagaagaacgccggatgttttatgtagctatgacccgt
gcaaagtccagactgcatattttctttttgaaagagcgttatggacggccaatggtgatg
tcacgttttgttggcgagattcttgtggacagggatgcggtcaaaccgggtatgcgcgtg
cagcatcagacgtatggcgccggcgtgatcaaggaagtgacggataaagcaattgttatc
cggttcgacaaaatacgacaggaaaagaaactggatattcaattttgtctggcaaatcaa
ttgctaaaaatacagtcttag
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