Chryseobacterium cucumeris: JNG87_11215
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Entry
JNG87_11215 CDS
T10197
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ccuc Chryseobacterium cucumeris
Brite
KEGG Orthology (KO) [BR:
ccuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccuc03016
]
JNG87_11215
Enzymes [BR:
ccuc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
JNG87_11215
Transfer RNA biogenesis [BR:
ccuc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
JNG87_11215
Prokaryotic type
JNG87_11215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_4
Lactamase_B
Lactamase_B_6
RTP
Motif
Other DBs
NCBI-ProteinID:
QRA41210
LinkDB
All DBs
Position
complement(2482860..2483774)
Genome browser
AA seq
304 aa
AA seq
DB search
MSTYLTILGFNSAIPTINTSPTAQLLEMEERLFLIDCGEGTQVQLRKAKARFSKINHIFI
SHLHGDHCFGLPGLIASFRLLGRDMPLHVYGPKGIKKMLETIFQITETHRGFEVIYHELD
KDYSEKIYEDNRVEVYTIPLDHRIYCNGYLFKEKPKDRHLNMKEIAKYSEIETCDYHNIK
AGKDFVLSDGYVLKNEILTVDPAPSVSYAFCSDTRYLESVIPIIKNVTVLYHESTFLHDL
KEMADYTGHTTALEAATIAQKAQVGKLILGHFSNRYGDLTVFTDEAREIFPNTFLPKALE
SVKI
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
ttgagtacttatttaacaatattaggttttaactctgcgattccgaccatcaacacgtca
cccacagcacagctgctggaaatggaagaaagactcttcctgatcgattgtggagaaggt
acacaggttcagctgagaaaagcaaaagcaagattttcaaaaatcaatcatatttttatc
tctcatcttcatggagatcattgttttgggctgccagggcttatagcttctttccgtctc
ttaggaagagatatgcctttgcatgtttacggtcctaaaggtattaagaagatgctggaa
actatttttcagatcacagaaacccaccgtggttttgaagtgatttatcatgaactggat
aaagattattctgaaaaaatatatgaggacaacagggtagaagtatatactattccgctg
gatcacagaatctactgtaacggttatctttttaaagaaaagccgaaagacagacatctt
aatatgaaggagattgcgaaatacagcgaaattgaaacctgcgattatcacaatatcaaa
gcagggaaggactttgtactgagtgatggctatgttcttaaaaatgaaattctgactgtt
gatccggctccatcggtatcctatgcattttgcagtgatacccgttatcttgaaagtgtc
atcccgattattaaaaatgtaacggttctataccatgaatccacattcttacatgatctt
aaggaaatggctgattatacaggtcataccacagctttggaagctgctacgatagctcag
aaagctcaggtcggaaagttgattttaggccacttttctaatagatacggggacctgacc
gtatttactgatgaggcgagagaaatatttcccaatacatttctgccaaaagcattggag
agtgtaaagatttaa
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