Corvus cornix (hooded crow): 104683308
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Entry
104683308 CDS
T03546
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104683308 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccw03400
]
104683308 (XPC)
DNA repair and recombination proteins [BR:
ccw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104683308 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
104683308
NCBI-ProteinID:
XP_010388411
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All DBs
Position
12:complement(10768838..10778334)
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AA seq
966 aa
AA seq
DB search
MGRKRRAAPWPVAGKKRRSGGLREEDEDEEDEEEGAYDFEKKKPSVKKNSKAPASKKEED
CDTGVSNSAKTSKPSKQKEAKSQIKESKRNGRNKENCIKEETCSDSLKCPQKEMKTESPV
KKEMDEDNTDDGGDDDDDDESEDEWEDVEELQEPATDKLEEAAVLPSVGLPRNPVEIEIE
TPEQMKKRERREKRKAEFEMYLRRMMKRFSKEVREDTHKVHLLCLLANGFYRNRICSQPD
LLAVGLSIVPARFTQVPAGHMGLVYLSNLVKWFVGTFTVNDELSTEKGEPLQSTLERRFA
IYAAQDDEELVHIFLIILRALQLLCRLVLSFQPIPLKETRPKGKSSSKRLSHSSTSEGQE
SSATTPKAGAKKCPCKKTKQDEKSSESKEDKKEPKKPKTAQTERTHRSKLTKGSQEQKES
NNESSLAEKDVPVRPKNDRRRRVASKVCYKEESGSDDGSGSNFEISEEESELSDEDFETV
PKRRRSSLAPQNSKVTTIKSPKTETSESRLSKSSCGAEPKPAKSTTPALPQAQRKRSKII
SSDEDDGQQEVRKAMGTDQWLEVFLEPEDKWVCVDCVHGNVGQPQLCFAHATKPLFYVVG
FDNNGSVRDVTQRYDPAWMTSTRKSRVDPEWWEETLQPYESPDVERDRKEENEFQVKLQD
QPLPTAIGEYKNHPLYALKRHLLKYQAIYPETAAILGYCRGEAVYSRDCIHTLHSRDTWL
KQARVVRVGEMPYKMVKGFSNRARKARLAEPANRDREDLALFGHWQTEEYQPPIAVDGKV
PRNEYGNVYLFLPSMLPVGCVQLKLPNLNRVARKLNIDCAQAITGFDFHGGYSHPVTDGY
VVCEEYKEVLVAAWENEQAEIEKKEKEKREKRALGNWKLLTKGLLIRERLKQRYSIKTEP
SAPETEKGGGFSSDEEGAPSSESAVGNTAIYWPQNRQLEKQEEKTTKKSKREKRGEAAQL
FPFEKL
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaaagcgcagagcagcgccctggcccgtggccggcaaaaagaggcgctccggg
gggctgcgggaggaagatgaagatgaggaggacgaggaggagggtgcgtatgattttgaa
aagaaaaaacccagtgtaaagaagaactcaaaggctccagctagtaaaaaggaagaagat
tgtgatactggagtttccaactcagcaaaaacttccaaaccttcaaaacaaaaagaggca
aaatcacaaataaaagaaagtaaaagaaatggtaggaataaagagaattgtatcaaagag
gaaacatgcagtgactcactgaagtgtcctcagaaggaaatgaagacagaatctcctgtt
aaaaaagagatggatgaagacaatactgatgatggtggtgatgatgatgatgatgatgaa
agtgaagatgaatgggaggatgtggaagaactccaggaacctgctacagataagttagaa
gaagctgctgttcttccatcagtggggctgccaagaaatcccgttgagattgagattgaa
accccagagcagatgaagaaaagagagaggagagaaaaaagaaaagctgagtttgagatg
taccttcggagaatgatgaaacgtttcagcaaggaggttcgtgaggacacacataaggtt
cacctgctgtgtttgttagcaaatggtttctataggaacaggatctgcagccagccagat
ctcctcgccgttggtctgtccatcgtccccgcccgcttcacccaagtgcccgcaggccac
atgggcctcgtttacctttccaacttggtgaaatggtttgttggaaccttcactgtcaat
gatgagctttccactgaaaaaggagagccccttcagtcaacactggagaggaggtttgcc
atctatgctgcacaggatgatgaggagctggttcatatatttttaattattctgcgagca
ttacagctgctgtgtcgcctcgtgctgtcttttcagcctattcctctcaaggagacaaga
ccaaagggaaagagctcatccaagaggctgtctcacagcagcacctctgaggggcaggag
agttctgccacaacacccaaagctggggcaaaaaaatgtccctgcaaaaaaaccaagcag
gacgagaaatcctcagagagcaaagaagacaagaaggagccaaagaaacccaaaactgcg
cagactgaaaggacacacaggtcaaagctgactaaaggcagccaggaacagaaggaatca
aataatgagagcagtttagcagaaaaggatgtgccagtcaggcccaagaacgaccgccgg
agacgagtggcctccaaggtgtgttacaaggaagagagtggaagtgatgatggcagtggt
tcaaactttgagatttcagaggaggagagtgaactctctgatgaggattttgaaactgtc
cctaaaaggcggaggagctcactggccccccagaattcaaaggtgacaactataaaaagc
cccaaaactgagacttcagaatcaaggctgtcaaaaagttcgtgtggagctgagcctaag
ccagcaaaaagtacaactccagccttgcctcaagcacagaggaagagaagcaaaataatt
tctagtgatgaggatgatggacagcaggaggtgaggaaagcaatgggcacagaccagtgg
ctggaggttttccttgagcctgaggacaaatgggtttgtgtagactgtgttcatggcaat
gtgggccagccccagctgtgcttcgcacatgccacaaagccgctgttctacgttgtgggg
tttgacaacaatgggagtgtcagggatgtgacacaaagatatgatccagcgtggatgacc
tcaacaaggaagagccgtgtggaccctgagtggtgggaagagacactgcagccatatgaa
agtcctgatgtggagagagacaggaaggaagaaaatgagtttcaagtgaagcttcaagat
caacctctaccaacagcaattggagagtacaaaaaccaccctctctatgcactgaagagg
cacctcttgaaataccaggccatctatcctgagacagctgctatcttgggctactgcaga
ggagaggctgtctactccagagactgcatacacacactgcactccagggacacttggctg
aagcaagctcgagtggtgagggttggagaaatgccttacaagatggtgaagggattttcc
aaccgggcgaggaaggcacgcctggcagagccggcgaaccgggaccgggaggacctggcg
ctgttcggccactggcagacagaggagtatcagcctcccatagcagtggatggaaaggtt
cctcggaatgaatatggaaatgtctatctcttcctgccatccatgttacctgttggctgc
gtgcagctgaaacttccaaacctgaacagagtggcacggaagttgaacattgactgtgct
caagccatcactggatttgattttcacggtggctactcgcacccagttactgatgggtat
gtggtgtgtgaagagtataaagaggtccttgttgctgcctgggagaatgaacaagcagaa
atagaaaagaaggagaaggagaagcgtgagaaaagagctttagggaattggaagctgctg
acaaaaggacttctcatcagagagagactgaagcaacgctactccatcaagactgagcca
tcagcacctgagacagagaaaggagggggattctcttctgatgaagaaggagctccaagc
tccgagagcgcagtggggaacacagccatttattggccccaaaatcgccagctagagaaa
caagaagagaaaacaaccaaaaagagcaagcgagaaaagagaggagaagcagctcagttg
ttcccatttgagaaattgtga
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