Corvus cornix (hooded crow): 104683826
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Entry
104683826 CDS
T03546
Symbol
RNF111
Name
(RefSeq) E3 ubiquitin-protein ligase Arkadia isoform X1
KO
K10635
E3 ubiquitin-protein ligase Arkadia [EC:
2.3.2.27
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104683826 (RNF111)
Enzymes [BR:
ccw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104683826 (RNF111)
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104683826 (RNF111)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF111_N
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
104683826
NCBI-ProteinID:
XP_039413612
LinkDB
All DBs
Position
10:14192773..14237570
Genome browser
AA seq
992 aa
AA seq
DB search
MSKWTPECNIVYTLKADMKSEVPSDAPKRQESLKGILLNPEPIGAAKSFTAEVEMIASKV
GNEFSHLCGDSQKQKDMNGNHTDQEKGIVVRKKRKSQQAGPSYTQNCPDKENKGILGLRQ
HLETQSEDNDSSFSDCISSPSSSLHFGDSDTVTSDEEKDAPVRHPQAVLNTPSRTHSARS
HKWPRTEADSVPGLLMKRPCFHNSSLRRLPYRKRVVKTGSSQRTQNQKERILMQRKKREV
LARRKYALLPSSSSSSENDLSTESSSSSSTEGEEDLFVSPGENHQNSTAVPSGSIDEDVV
VIEASSTPQVTANEEINVTSTDSEVEIVTVGENYRSRSALGHSRSHWGQSSSSHAARPPE
QRSRSRISTVIQPLRQNAAEVVDLTVDEDEPTVVPTTSARVEPQVVSSASTTSSSTSTSE
QASDAAPNVSTSQPSAAPETTPSLPSGSTAGTSAGDEMRRAASNSTLETGPPAMPRLPSC
CPQHSPCGGPSQTHHALGHPHTSCFQQHGHHFQHHHHHHHNPHPAVPLSPSFSDSSCPVE
RPPPVPAPCGAGSSSGTSYHEQALPVDLSSSGIRSHGSGAFHGTSAFDPCCPGSSSRTTL
YGHQAGAGPSQSLAIDGYGSGIVAQPQPQPPPQASLSSCRHYMHSPYASLTRPLHHQASA
CPHSHGNPPPQPQPPPQVDYVIPHPVHPFHPSISSHASSHPVPPPPPTHPLANAAAPIPQ
HLPATHQPISHHIPATAPPAQRLHPHEVIQRMEVQRRRMMQHPTRAHERPPPHPHRMHPN
YGHGHHIHVPQTMSSHPRQAPERSAWELGIEAGVTAATYPPGPLHPHLAHYHAPPRLHHL
QIGALPLMVPDMAGYPHIRYISSGLDGTSFRGPFRGNFEELIHLEERLGNVNRGATQGTI
ERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRRLPCMH
LFHQVCVDQWLITNKKCPICRVDIEAQLPSES
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaatggactcctgaatgtaatatagtttatactctaaaagcggatatgaagagt
gaagttccttctgatgcaccaaagagacaggagagtctgaaggggatcctcttgaaccct
gagcctattggggcagccaaaagcttcactgcagaagttgagatgattgccagtaaagta
gggaatgagttctctcacttgtgtggtgattctcaaaaacaaaaggacatgaatggcaac
catacagaccaagaaaaaggtattgtggtgcgaaaaaaacgcaagagccagcaggctggt
ccttcatacactcaaaactgtcctgataaagaaaataaaggaatcttgggattgagacag
catctagaaacacagagtgaagacaatgattcttcttttagtgactgtatctcttcacct
tcctctagcttgcattttggagactctgacacagtaacatctgatgaagaaaaagatgct
cctgtgagacaccctcaggcagtgttgaatactccaagtagaactcacagtgcaaggtca
cacaagtggcctcggactgaggcagactctgtacccgggttattgatgaaaaggccctgt
tttcacaatagttctttaagaagacttccatataggaagagagttgtgaaaacaggttca
tcacagcggacacagaaccaaaaagaacgaattttaatgcagaggaaaaagcgggaagtg
ttagctcgaagaaagtatgctttactccccagttctagcagctccagtgagaatgatctc
agtactgaatcttcttccagttcatctactgaaggggaggaagacttgtttgtgtcacct
ggtgaaaaccaccagaatagcacagctgttccttcaggaagtatcgatgaagatgttgtg
gtgattgaagcgtcctccactccccaagtcactgctaacgaagaaataaatgttacctca
acagatagtgaagtggagattgtcactgttggtgaaaactacaggtctcgttctgctctc
ggacactcgagatcacactggggccagagctccagttcccacgctgcccggcctccggag
cagcgatcccgaagcaggatctccacagtcattcagcccctgaggcagaacgcagctgaa
gtcgtggacctcaccgtggatgaagatgagccgacagttgtgccaaccacatcagctcga
gtggagccgcaggttgtgagttctgcttccactaccagctccagtacgtctacctcagag
caggcctctgatgcagctcccaacgtctccaccagccagccctctgcagcaccagagacc
actcccagtctccccagtggcagcactgctggtacttcagctggagatgaaatgagaaga
gctgcatctaattcgacactggaaactggccctccggccatgccaaggctaccatcgtgc
tgcccccagcattctccttgtggaggaccttcacagactcatcatgcattggggcaccca
catacaagctgctttcagcagcatggccaccacttccagcaccaccaccaccaccaccac
aatcctcacccagctgtcccgctatctccttcgttcagtgattccagctgccctgtggaa
aggcctccccccgtgcctgccccatgtggagcaggcagcagttctggcaccagttaccac
gagcaggcattgccagtagacttaagcagcagtggtatcagaagtcatggaagcggtgct
ttccatggaacatctgctttcgatccgtgctgccctggctcttcgtcacgcacgacgctc
tacgggcaccaggcgggcgctgggcccagccagtcgctggcgatagacgggtacggatcg
ggcatcgtggcacagcctcagccgcagccgccgccccaggcatcgctctcctcctgccgc
cattacatgcattctccttatgcttccttgaccagacctcttcaccatcaagcttctgca
tgtcctcactctcatggaaatcctcctccacagccacagcctccacctcaagtggattat
gttatccctcatccagtgcatccctttcatccttcaatctcctctcatgcgtcttctcat
cctgttccacctccaccaccaactcatcccttagccaatgcagctgctccaataccacag
catctccctgcaacacaccagcctatatcccatcacatccctgcaacagcacctccagca
cagaggctacatcctcatgaagtgatccagaggatggaggtccagagaagaagaatgatg
caacatccaacacgcgctcatgagcggcctcctccacatcctcacagaatgcatcccaat
tatggtcatgggcatcacatccatgtgcctcagactatgtcttcccatcctcgacaggct
ccagagagatctgcctgggaactaggaattgaagctggtgtgactgcagccacttaccct
ccagggcccttgcatcctcacttggcccactaccatgcacctcctcgactgcatcacttg
caaataggggctcttcctctaatggtaccagacatggcgggctaccctcacatccgttac
atttcatcgggattggatggaacttcattcagaggccctttcaggggcaattttgaggag
ctgattcacttggaggaacgactaggcaatgttaatcgtggagcaacacagggaactata
gaaagatgcacatatccccataaatacaaaaaggtaacaactgattggttctcacagagg
aaactgcactgcaaacaagatggggaggaaggaacagaagaagacacagaggaaaagtgc
accatctgtttgtctatattggaggaaggtgaagatgtcaggcgccttccatgtatgcac
cttttccaccaagtatgtgtagatcagtggttgattactaacaagaagtgccccatttgc
agagtggacattgaggctcagctgcctagtgaaagttga
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