Corvus cornix (hooded crow): 104686308
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Entry
104686308 CDS
T03546
Symbol
NPAS2
Name
(RefSeq) neuronal PAS domain-containing protein 2 isoform X1
KO
K09026
neuronal PAS domain-containing protein 2
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104686308 (NPAS2)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
104686308 (NPAS2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
Motif
Other DBs
NCBI-GeneID:
104686308
NCBI-ProteinID:
XP_039404657
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All DBs
Position
1:87733191..87840280
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AA seq
930 aa
AA seq
DB search
MRQGTGTGGRQEAGSVPGSSSARKSLPAPEAGLLRGWSSGGRCRSGTGRHRKSGGIQLGG
TGTSTGGGSRAQVATADSSSSSSGGGGGGGWGFPAALPQHRHPRKYCLDNLMDEDEKDRA
KRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHNEVSAQTEIS
EIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTGGSIIYVSDSITPLLGHLPCDVLDQNL
LNFLPEQEHSEIYKMLSSCMLMTDSASSDYLKTDNELEFYCHLLRGSLNPKEFPTYEYIK
FVGNFRSYSNVPNSTCNGFDEAVPRAYRTSPGKQICFVATVRLATPQFLKEMCIVEEPLE
EFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHEHLMQFGKG
KSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHMVVSYADVRVERRQEMGLEEV
SSEVVSSALKDSGTSLDPEQHFNALDIGASILSASRTPSVSSRSSPKSSHTPKSDPASTP
TKLITESNTPVPRTPSTQQDLSVHRLSQPTALQVSLPSQLPCELLPQQLLPQATLQNQPA
PLAQFSAQFSMFQTIKDQLEQRTRILQANIRWQQEELQKIQEQLCLVQDSSVQMFLQQPT
VSLSFNNTQQLDPQQLQQRSGAISQQQLVPSPQLQGQITSSQTTNQQALREASVISNQGP
KAARSAELAPGGGRAPLRTAPAPFASGGGPAAPPGGLSRGGAPAPAGCSHDQQLRLLLSQ
PIQPMMPGSCNARHPSDLSMAGSQAKYSQTQQMFQSLEVQTSSSSSPIVLMGQAVLNQGF
TTSPPSQPSSLPPMQLQHQQHQQQRYLQVQTPSSLHNEQPDSLLLPSYSPQQGNIGYHQT
QQQQQQQQQQLTSRRRNSLSESSNLPQPLR
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgagacagggcaccggcaccggcggcaggcaggaggcgggcagtgtccccggctcctcg
tcggcaaggaagagtttgccggctcccgaggccggcctcctgcgcggctggagcagcggc
ggccgctgccgcagcggcaccggcaggcaccggaaaagcggcggcatccagctcggcggc
accggcaccagcaccggcggcggttcccgcgcccaggtggccaccgcggacagcagcagc
agcagcagcggcggcggcggcggcggtggctggggcttccccgccgcgctcccgcagcac
cggcaccccagaaaatactgcttagacaatctaatggatgaagatgagaaagacagggca
aagagggcttcgcgtaacaagtctgagaagaagaggcgcgatcagttcaatgttctcatc
aaagagctcagctccatgcttccaggcaacactcgcaaaatggacaaaactactgtgctg
gaaaaagtcatcggctttctgcagaaacacaatgaagtctcagcacagacagagatttct
gaaattcagcaggactggaagccttcatttctcagcaatgaagaattcacccagctgatg
ttggaggcattggatggcttcattatagcagtaacaacaggtggaagcatcatctatgtg
tctgacagcatcacacctcttctagggcatttaccgtgtgatgtgttggatcagaatctg
ttaaacttcctcccagaacaagaacactcagaaatttataagatgttatcttcttgtatg
cttatgacagattctgcctcatcggattacctaaaaactgacaatgaactagagttttat
tgtcatcttctgagaggaagtttgaacccaaaggaatttccaacatatgaatacataaaa
tttgtaggaaattttcggtcttacagcaatgtgcctaactccacttgcaatggctttgat
gaggctgtcccaagggcttacagaacatccccaggaaagcaaatctgctttgttgccact
gttcgtttggcaacgcctcagtttttaaaggagatgtgcattgtagaagaacctctagag
gaattcacatcaagacacagtctggagtggaagtttttattcctggatcacagagcgccg
cccattatcggatacttgccttttgaagtgctgggtacttctggctacgactattaccac
atagatgacctcgagctgctagcaaggtgccatgaacacttgatgcagttcggcaagggg
aagtcgtgctgctatcggtttctgaccaaaggacagcagtggatctggctccagacccat
tactacatcacctaccaccagtggaactccaagccagagttcattgtgtgcacacacatg
gtggtaagttatgcagatgttcgggtggagaggagacaggagatgggcttggaagaagtg
tcctcagaggttgtgtcctcagcactaaaggacagtggcaccagcttggatcctgaacag
cactttaatgcacttgatattggtgcctcaatcctcagcgctagtcggacaccctcagtg
tcatccaggagctcgccaaaatcctcccacacacccaagtcagacccagcatctacacca
acaaagctgattacagagtctaacactcccgtgccaagaacaccaagcacacaacaggat
ttatccgtgcacagactcagccaacctactgctcttcaggtttctttgccttctcagctt
ccatgtgagcttctcccacagcagttgctgcctcaagcaactctgcaaaatcagcccgca
cctctggcacagttctcagcacaattcagcatgttccagaccatcaaggaccagctggag
cagcggacacggatcttgcaggccaacatccggtggcagcaggaggagctccagaagata
caggagcagctctgcctggtccaagactccagtgtacagatgttcttacagcagccgaca
gtgtccctgagctttaacaatactcagcagctggacccacaacagctacagcagaggtca
ggggccatttctcagcagcagcttgtccccagtcctcaacttcaagggcaaatcacatct
tcacaaacaacgaaccagcaggcactgagagaagcaagtgtgatatcgaaccagggcccg
aaggcggcgcggagcgcggagctggcgccgggcggcggccgcgccccccttcgcaccgcg
cccgcgccgttcgcctcaggcggcggccccgcggcgccccctggcggcctgtcccgcggc
ggcgcccccgcgcccgccggctgcagccacgaccagcagctcagattgttgcttagccag
cctattcagcccatgatgcctggctcctgtaatgcaagacacccttcagacctcagcatg
gcgggatcccaggctaagtattctcaaacccaacaaatgtttcaaagtttggaagtgcag
acttccagcagcagctctccaatcgtactgatgggacaagcagtgttaaaccaagggttc
accactagccctccttcccagccatcctctttgccacctatgcaactccagcaccaacag
catcagcaacaacgctacctgcaggtgcaaacaccaagttctttgcacaatgaacaaccc
gattctttgctcctgccatcttactcaccacagcaaggaaatattgggtatcatcagaca
cagcagcagcaacaacaacaacaacaacaactaacatcaagaagaaggaatagtttgtca
gaatcatcaaatttaccacagccactgcgatag
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