Corvus cornix (hooded crow): 104688312
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Entry
104688312 CDS
T03546
Symbol
POMT1
Name
(RefSeq) protein O-mannosyl-transferase 1
KO
K00728
dolichyl-phosphate-mannose-protein mannosyltransferase [EC:
2.4.1.109
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00514
Other types of O-glycan biosynthesis
ccw00515
Mannose type O-glycan biosynthesis
ccw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
104688312 (POMT1)
00514 Other types of O-glycan biosynthesis
104688312 (POMT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccw01003
]
104688312 (POMT1)
Enzymes [BR:
ccw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.109 dolichyl-phosphate-mannose---protein mannosyltransferase
104688312 (POMT1)
Glycosyltransferases [BR:
ccw01003
]
O-Glycan biosynthesis
O-linked Man type
104688312 (POMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMT
PMT_4TMC
MIR
Motif
Other DBs
NCBI-GeneID:
104688312
NCBI-ProteinID:
XP_010396055
LinkDB
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Position
17:complement(4573045..4586049)
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AA seq
725 aa
AA seq
DB search
MLGFLKEPVVVTAKINVNLVALTVMGLISRLWGFCYPRAVVFDEVYYGQFVSLYMKRIFF
VDDSGPPFGHMLLALGGYLGGFDGNFLWNRIGAEYSMNVPVWSLRLLPALAGALCVPLAY
QILVELHFSHCAALGAALLILLENSLITQSRFMLLESILIFFILLAVLSYLKFYNLKKHS
AFSGSWWFWLLLTGVACSCAVGVKYMGLFTYMLLLATAGLHFWHMIGDQDLSNVSLLCHF
LARGLALIIIPMGLYLSFFYVHLALLYRSGPHDQIMTSAFQASLEGGLARITQGQPLEVA
YGSQITLRNVLGKPVQCWLHSHTNTYPIRYENGRGSSHQQQVTCYPFKDVNNWWIVKDPG
MQQLVVSNPPRPVRHGHIVQLVHGITTRYLNTHDVAAPLSPHAQEVSCYIDYNISMPAQN
LWRVEIVNRESDTDVWKTILSEVRFVHVNTSAVLKLSGASLPEWGYRQLEVVGEKLSKGY
HQSMVWNVEEHRYGKSQEQKEREVELHSPTQMDISKNLSFMAKFTELQWKILTLKNEDTE
HKYSSSALDWITMDTNIAYWLHPTSGAQIHLLGNVATWASANAAVLIYLCLSLWYLLRRR
RKIYDIPEDAWQLWVSAGGICGGGWAVNYLPFFLMEKTLFLYHYLPALTFQILLIPVVLQ
HLGDHLCRSVLLKSMFSALLVAWFSSVYFVYCTFSPVTYGQPALALTELKALRWKDTWNI
LIRKQ
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgttggggtttctgaaggagccagttgtggtcactgcaaagatcaatgtgaacctcgtg
gcactgactgtgatgggattaataagtcgtctttgggggttttgctatccacgggctgtg
gtgtttgatgaagtttattatggccaattcgtttcactctacatgaagaggatcttcttt
gtggatgacagtggcccaccttttggccacatgctgctggccttgggaggttacttagga
ggatttgatggaaacttcctatggaacaggatcggagctgaatacagcatgaatgttcct
gtgtggtccctgcgactcctgccagctctggctggtgctctctgtgtgcctttagcctac
cagattttggttgaactgcacttctcccactgtgctgcacttggagctgctcttcttatt
ctcttagagaactctctgatcactcaatcaaggttcatgcttctggaatcaatactgatt
ttttttatcctgcttgcagttttgtcctacctgaagttctacaatttgaaaaagcacagt
gccttctctggaagctggtggttttggctcctgctgactggagtagcctgttcttgtgca
gttggagtgaaatatatgggcctgtttacctatatgctgctcttggccactgcaggactc
cacttctggcacatgataggagaccaggacttgtcaaatgtttccttgctgtgccatttt
ctagcccggggtctggccctcatcatcatccccatggggttgtacctctccttcttctat
gttcacttggctttgctgtatcgctctgggcctcatgaccagatcatgacaagtgctttc
caagccagcttagagggtgggctggctcgaatcactcagggtcagcccttagaggtggcc
tacggctctcagatcaccctgcggaacgtgctgggcaagcccgtgcagtgctggctccat
tctcacaccaacacttaccccatcaggtatgagaatggccgagggagttcccatcaacag
caggtgacctgctatcccttcaaggatgtgaacaactggtggattgtcaaagatcctgga
atgcagcagcttgtggtgagcaacccaccgcggcccgtcaggcacgggcacatcgtgcag
ctggtccatggcatcacaactcgctacctcaacacgcatgatgttgctgcccctcttagc
ccccacgcccaagaagtttcctgctatattgattataacatctccatgccagcacagaac
ctctggagagttgaaattgtaaatcgtgagtctgacacggatgtgtggaagacaattctg
tcagaagtgaggtttgttcacgtgaacacctctgcagtgctaaagctcagtggagcatct
ctacctgagtggggataccggcagctggaggtggttggagagaagctgtccaaaggctac
caccagagcatggtgtggaatgtggaagagcacagatatgggaaaagccaagagcaaaaa
gagagggaagtggaactccactctcccacacagatggacatcagtaaaaacctcagcttc
atggcaaagttcacagaattgcaatggaaaatactcacattaaaaaatgaagacacagaa
cataagtacagctcctctgccctggactggatcacaatggacaccaatattgcctactgg
ctccacccgacctcgggggcccagatccacctccttgggaatgttgccacctgggcttca
gctaatgctgctgttctgatctacctgtgtctgtccctgtggtacttgctacggcgaagg
aggaagatttacgacatccctgaagatgcctggcagctctgggtgtcagcgggaggcatc
tgtggtggaggctgggctgtgaattacctgcccttcttcctgatggagaaaacacttttc
ctgtaccactacctgcctgctctcacattccagattctcctcattcccgtggtactgcag
catcttggcgatcatctctgcagatctgtgctgctcaagagcatgttcagtgcactgctt
gtagcctggttctcctcggtgtactttgtgtactgcaccttcagccccgtgacctacggg
cagcccgcgctggccctcacggaactcaaggccttgcgctggaaggacacctggaacatc
ctcatccgaaagcagtga
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