Corvus cornix (hooded crow): 104691131
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Entry
104691131 CDS
T03546
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03030
DNA replication
ccw03410
Base excision repair
ccw03420
Nucleotide excision repair
ccw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104691131 (RFC2)
03410 Base excision repair
104691131 (RFC2)
03420 Nucleotide excision repair
104691131 (RFC2)
03430 Mismatch repair
104691131 (RFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccw03032
]
104691131 (RFC2)
03036 Chromosome and associated proteins [BR:
ccw03036
]
104691131 (RFC2)
03400 DNA repair and recombination proteins [BR:
ccw03400
]
104691131 (RFC2)
DNA replication proteins [BR:
ccw03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104691131 (RFC2)
DNA Replication Termination Factors
ELG1-RFC complex
104691131 (RFC2)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104691131 (RFC2)
DNA repair and recombination proteins [BR:
ccw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104691131 (RFC2)
Check point factors
HRAD17(Rad24)-RFC complex
104691131 (RFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_22
nSTAND_NTPase5
AAA_14
RCF1-5-like_lid
AAA_16
Viral_helicase1
Mg_chelatase
Rad17
AAA_11
AAA_assoc_2
RuvB_N
nSTAND3
AAA_19
DNAX_ATPase_lid
AAA_24
MipZ
AAA_18
AAA_5
AAA_28
ABC_tran
AAA_25
AAA_23
AAA_30
NTPase_1
SLFN-g3_helicase
MeaB
RNA_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
104691131
NCBI-ProteinID:
XP_039418591
LinkDB
All DBs
Position
19:3464474..3472976
Genome browser
AA seq
353 aa
AA seq
DB search
MEVDVAEDEKAGPSAGEKRGSAEPAPIGGSGHYELPWVEKYRPMKLSEIVGNEDTVSRLE
VFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPI
QSRCAVLRYTKLTDAQILARLLKIVEKEDVSYTDDGLEAIIFTAQGDMRQALNNLQSTYS
GFGFINSENVFKVCDEPHPLLVKEMIQHCINANIDEAYKILAHLWRLGYSPEDVIGNIFR
VCKTFQMPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTAAPAAS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggatgtggcggaggacgagaaggccgggccgtcggcaggcgagaagcgggga
tccgctgagcccgcgcccatcggcggcagcggccactacgagctgccctgggtggaaaaa
tacagacccatgaaactgtctgaaatagttggaaatgaagatactgtgagcagattggag
gtctttgcaaaagagggaaatgtaccaaatattataattgctggccctccaggaacaggt
aaaaccaccagtatcctgtgcctggctcgtgctctgcttggtcctgcattaaaggatgct
gttctggagctgaatgcctcaaatgacagaggcattgatgttgtaagaaacaaaatcaaa
atgtttgcccagcaaaaggtgacacttccaaaaggtcggcataaaataatcatccttgat
gaagcagacagcatgacagatggagcacagcaagcattgagaagaacaatggaaatttat
tccaaaacaacacgcttcgcacttgcgtgcaatgcctctgacaaaatcatagaacctata
cagtctcggtgtgcagtgctgcgttacaccaagctgacagatgcacaaatccttgccagg
ctactgaaaattgttgagaaagaggatgtatcatatacagacgatggactagaagccata
atcttcacagcccaaggtgatatgagacaggcattaaacaacctacaatccacatactct
ggatttggctttataaacagtgaaaatgtctttaaggtatgtgatgagcctcatcctctg
cttgtgaaggaaatgatacaacactgcataaatgcaaatattgatgaagcatacaagatt
cttgcccacctgtggcgacttggatactctccagaagatgtcattggcaatatcttccgt
gtgtgtaaaacctttcaaatgccagaatatctgaaactggaatttatcaaggaaatcggg
tacactcacatgaagatagcagaaggtgtgaactcccttttacaaatggctgggctgctg
gcccggctgtgccagaagactgcagcccctgcagccagttag
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