Corvus cornix (hooded crow): 104691807
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Entry
104691807 CDS
T03546
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X3
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccw04812
]
104691807 (KATNB1)
Cytoskeleton proteins [BR:
ccw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
104691807 (KATNB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_WDR41
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
eIF2A
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_HPS5
RMC1_N
Beta-prop_pof12
PROPPIN
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
Tricorn_2nd
Beta-prop_RIG_1st
Beta-prop_LRRK2
WDR54
Beta-prop_IP5PC_F
Beta-prop_ACSF4
VPS8_N
Beta-prop_WDR11_1st
WD_LRWD1
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
104691807
NCBI-ProteinID:
XP_019143902
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Position
11:complement(6449320..6467170)
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AA seq
641 aa
AA seq
DB search
MAHSSNVSSVVLGKGSGRMLATGGDDCRVNIWSVSKPNCIMSLTGHTTPIESLQVNPNEK
LIVAGSRSGSIRVWDLEAAKVLRTLPGHKANICSLHFHPFGSFVASGSLDTNIKLWDVRR
KGCIFTFKGHTEAVRCLRFSPDGKWVASAADDHTVKLWDLTAGKLMFEFTGHTGPVNVVE
FHPNEYLLASGSSDRTVRFWDLEKFQVVSCIEEEATPVRCVLFNPDGCCLYSGFQDSLRV
YGWEPERCFDVVLVNWGKVADLSISNNQLIGVSFAQSTVSSFVVDLSRVPKSDSIPHGLI
RDDQPLVPPTPTGSSLRRIYDRPSTSCSKPQSRVKHNSESERHSPSSEDDRDEKESKAEI
QNQEDYKEIFQPKNAICRTPPRNEPFPAPPEDEPGTAKEAVKPSQAADVQTSLPKQELPD
PVQRPAIASSTSLSRTEPSVIPAARNEPIGLKASDFLPAVKNQSQTELVDEEAMSQIRKG
HETMCVVLTSRHKNLDTVRAVWSTSDIKNSLDSAVAINDLSVVVDLLNIVNQKASLWKLD
LCTIVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAAPPSVGVDISREERLH
KCKLCYKQLKNISNVVKNKSGLSGRHGSAFRELLLLMAVLD
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggcccacagcagcaatgtatcctcagtagtcctgggaaaaggttcaggccggatgctg
gccactggaggtgatgactgtcgggtcaacatatggtcagttagcaagcccaactgcatc
atgagcttgactggccacacaacccccatcgagagcctacaggtcaacccaaatgagaag
ctcatagttgcagggtcccggtcaggatccattcgagtttgggacctggaagctgccaaa
gttcttcgtaccttaccaggtcacaaagcgaatatctgcagccttcatttccatcctttt
ggaagctttgtggcatctggctccttggacaccaacattaagctctgggatgtaagaaga
aaaggctgtatcttcacattcaagggtcacacagaagcagttcggtgtctccgctttagc
cctgatgggaaatgggtggcctctgctgctgatgatcacactgtaaagctgtgggatctg
actgctgggaagttaatgtttgagtttacaggacataccggcccagtaaacgttgttgaa
ttccatcccaatgaataccttttggcttctggcagctctgacaggactgttcggttctgg
gacttggagaagtttcaagttgtgagctgtattgaagaggaagctactcctgtcaggtgt
gtgctcttcaacccagatggctgctgcttgtacagcggcttccaggattcgctgcgtgtg
tacggctgggagccagagcgctgttttgatgtggtcttggtgaactggggaaaagtagct
gacttgtctatcagcaacaaccagctgataggagtttcctttgcacaaagcacagtctct
tccttcgttgtggatctcagcagagtcccaaagtcagattctattcctcatgggttgatc
agggacgaccagcctcttgtgccacctacccccacagggtcctcccttcgccgcatctat
gacaggccctcaacgagctgcagcaagccacagagcagagtgaagcacaattcggagagt
gagaggcacagtcctagcagtgaagatgaccgggatgagaaggaatcaaaggctgagatc
cagaaccaggaggattacaaagagatcttccagcccaagaatgcgatctgccgaactcct
cctcgaaatgagccctttccagcccctcctgaggatgagcctggaactgcaaaggaagca
gtgaagcccagccaagctgcggatgtccagacctcgttgccaaagcaagagctccctgat
ccagtccagaggccagcgattgcctcctcaacttctttgagcagaacagagccatcagtg
attccggcagccaggaatgagcccattggcctgaaggcctctgactttctcccagctgtg
aaaaaccaaagccagacggagctggtggatgaggaagccatgtcccagatcaggaaaggc
cacgagaccatgtgtgtggtgctcaccagccgccacaagaacctggacaccgtgcgggct
gtatggagcaccagtgacatcaagaactctctggactctgcagtggcaatcaatgatctg
tctgttgtcgtggatctcttgaatattgtcaaccaaaaagcgtctctctggaagctggat
ttgtgtactatagtcctgccgcagatagaaaaactgctccaaagcaaatacgaaagttac
gtgcagactggctgcacatccctgaagctcattctccagagattcctgccactcatcaca
gacatccttgctgcaccaccttctgttggagtggacatcagcagagaggaaaggcttcac
aaatgcaagttgtgctacaagcagctgaaaaacatcagcaatgttgttaagaacaagtct
gggctcagcggccgccatggtagtgcctttcgggaactgcttctcctcatggctgtcctg
gactaa
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